255 related articles for article (PubMed ID: 21106756)
1. Pathology tissue-chromatin immunoprecipitation, coupled with high-throughput sequencing, allows the epigenetic profiling of patient samples.
Fanelli M; Amatori S; Barozzi I; Soncini M; Dal Zuffo R; Bucci G; Capra M; Quarto M; Dellino GI; Mercurio C; Alcalay M; Viale G; Pelicci PG; Minucci S
Proc Natl Acad Sci U S A; 2010 Dec; 107(50):21535-40. PubMed ID: 21106756
[TBL] [Abstract][Full Text] [Related]
2. Chromatin immunoprecipitation and high-throughput sequencing from paraffin-embedded pathology tissue.
Fanelli M; Amatori S; Barozzi I; Minucci S
Nat Protoc; 2011 Nov; 6(12):1905-19. PubMed ID: 22082985
[TBL] [Abstract][Full Text] [Related]
3. Epigenomic profiling of archived FFPE tissues by enhanced PAT-ChIP (EPAT-ChIP) technology.
Amatori S; Persico G; Paolicelli C; Hillje R; Sahnane N; Corini F; Furlan D; Luzi L; Minucci S; Giorgio M; Pelicci PG; Fanelli M
Clin Epigenetics; 2018 Nov; 10(1):143. PubMed ID: 30446010
[TBL] [Abstract][Full Text] [Related]
4. Chromatin Immunoprecipitation and High-Throughput Sequencing (ChIP-Seq): Tips and Tricks Regarding the Laboratory Protocol and Initial Downstream Data Analysis.
Patten DK; Corleone G; Magnani L
Methods Mol Biol; 2018; 1767():271-288. PubMed ID: 29524141
[TBL] [Abstract][Full Text] [Related]
5. The Current State of Chromatin Immunoprecipitation (ChIP) from FFPE Tissues.
Amatori S; Fanelli M
Int J Mol Sci; 2022 Jan; 23(3):. PubMed ID: 35163027
[TBL] [Abstract][Full Text] [Related]
6. fCCAC: functional canonical correlation analysis to evaluate covariance between nucleic acid sequencing datasets.
Madrigal P
Bioinformatics; 2017 Mar; 33(5):746-748. PubMed ID: 27993776
[TBL] [Abstract][Full Text] [Related]
7. A High-Throughput Chromatin Immunoprecipitation Sequencing Approach to Study the Role of MYC on the Epigenetic Landscape.
Fagnocchi L; Zippo A
Methods Mol Biol; 2021; 2318():187-208. PubMed ID: 34019291
[TBL] [Abstract][Full Text] [Related]
8. MOWChIP-seq for low-input and multiplexed profiling of genome-wide histone modifications.
Zhu B; Hsieh YP; Murphy TW; Zhang Q; Naler LB; Lu C
Nat Protoc; 2019 Dec; 14(12):3366-3394. PubMed ID: 31666743
[TBL] [Abstract][Full Text] [Related]
9. Profiling Chromatin Landscape at High Resolution and Throughput with 2C-ChIP.
Wang XQD; Cameron CJF; Segal D; Paquette D; Blanchette M; Dostie J
Methods Mol Biol; 2021; 2157():127-157. PubMed ID: 32820402
[TBL] [Abstract][Full Text] [Related]
10. Automating ChIP-seq experiments to generate epigenetic profiles on 10,000 HeLa cells.
Berguet G; Hendrickx J; Sabatel C; Laczik M; Squazzo S; Mazon Pelaez I; Saxena R; Pendeville H; Poncelet D
J Vis Exp; 2014 Dec; (94):. PubMed ID: 25549003
[TBL] [Abstract][Full Text] [Related]
11. Profiling Histone Methylation in Low Numbers of Cells.
Brind'Amour J; Lorincz MC
Methods Mol Biol; 2022; 2529():229-251. PubMed ID: 35733018
[TBL] [Abstract][Full Text] [Related]
12. ChIP-Seq: Library Preparation and Sequencing.
Sheaffer KL; Schug J
Methods Mol Biol; 2016; 1402():101-117. PubMed ID: 26721486
[TBL] [Abstract][Full Text] [Related]
13. PAT-ChIP coupled with laser microdissection allows the study of chromatin in selected cell populations from paraffin-embedded patient samples.
Amatori S; Ballarini M; Faversani A; Belloni E; Fusar F; Bosari S; Pelicci PG; Minucci S; Fanelli M
Epigenetics Chromatin; 2014; 7():18. PubMed ID: 25104973
[TBL] [Abstract][Full Text] [Related]
14. Native internally calibrated chromatin immunoprecipitation for quantitative studies of histone post-translational modifications.
Grzybowski AT; Shah RN; Richter WF; Ruthenburg AJ
Nat Protoc; 2019 Dec; 14(12):3275-3302. PubMed ID: 31723301
[TBL] [Abstract][Full Text] [Related]
15. Chromatin Immunoprecipitation Sequencing (ChIP-seq) Protocol for Small Amounts of Frozen Biobanked Cardiac Tissue.
Pei J; van den Dungen NAM; Asselbergs FW; Mokry M; Harakalova M
Methods Mol Biol; 2022; 2458():97-111. PubMed ID: 35103964
[TBL] [Abstract][Full Text] [Related]
16. Next-generation sequencing applied to flower development: ChIP-Seq.
Graciet E; O'Maoiléidigh DS; Wellmer F
Methods Mol Biol; 2014; 1110():413-29. PubMed ID: 24395273
[TBL] [Abstract][Full Text] [Related]
17. Chromatin integration labeling for mapping DNA-binding proteins and modifications with low input.
Handa T; Harada A; Maehara K; Sato S; Nakao M; Goto N; Kurumizaka H; Ohkawa Y; Kimura H
Nat Protoc; 2020 Oct; 15(10):3334-3360. PubMed ID: 32807906
[TBL] [Abstract][Full Text] [Related]
18. Analysis of Histone Modifications in Acute Myeloid Leukaemia Using Chromatin Immunoprecipitation.
Shields BJ; Keniry A; Blewitt ME; McCormack MP
Methods Mol Biol; 2018; 1725():177-184. PubMed ID: 29322418
[TBL] [Abstract][Full Text] [Related]
19. Profiling the Epigenetic Landscape of the Spermatogonial Stem Cell-Part 1: Epigenomics Assays.
Cheng K; McCarrey JR
Methods Mol Biol; 2023; 2656():71-108. PubMed ID: 37249867
[TBL] [Abstract][Full Text] [Related]
20. Quantitative Comparison of Multiple Chromatin Immunoprecipitation-Sequencing (ChIP-seq) Experiments with spikChIP.
Blanco E; Ballaré C; Di Croce L; Aranda S
Methods Mol Biol; 2023; 2624():55-72. PubMed ID: 36723809
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]