These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

265 related articles for article (PubMed ID: 21143803)

  • 1. Predicting RNA-binding residues from evolutionary information and sequence conservation.
    Huang YF; Chiu LY; Huang CC; Huang CK
    BMC Genomics; 2010 Dec; 11 Suppl 4(Suppl 4):S2. PubMed ID: 21143803
    [TBL] [Abstract][Full Text] [Related]  

  • 2. RNA-binding residues in sequence space: conservation and interaction patterns.
    Spriggs RV; Jones S
    Comput Biol Chem; 2009 Oct; 33(5):397-403. PubMed ID: 19700370
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A MOTIF-BASED METHOD FOR PREDICTING INTERFACIAL RESIDUES IN BOTH THE RNA AND PROTEIN COMPONENTS OF PROTEIN-RNA COMPLEXES.
    Muppirala U; Lewis BA; Mann CM; Dobbs D
    Pac Symp Biocomput; 2016; 21():445-455. PubMed ID: 26776208
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Prediction of protein-RNA binding sites by a random forest method with combined features.
    Liu ZP; Wu LY; Wang Y; Zhang XS; Chen L
    Bioinformatics; 2010 Jul; 26(13):1616-22. PubMed ID: 20483814
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SVM based prediction of RNA-binding proteins using binding residues and evolutionary information.
    Kumar M; Gromiha MM; Raghava GP
    J Mol Recognit; 2011; 24(2):303-13. PubMed ID: 20677174
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Protein-RNA interface residue prediction using machine learning: an assessment of the state of the art.
    Walia RR; Caragea C; Lewis BA; Towfic F; Terribilini M; El-Manzalawy Y; Dobbs D; Honavar V
    BMC Bioinformatics; 2012 May; 13():89. PubMed ID: 22574904
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Computational Prediction of RNA-Binding Proteins and Binding Sites.
    Si J; Cui J; Cheng J; Wu R
    Int J Mol Sci; 2015 Nov; 16(11):26303-17. PubMed ID: 26540053
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Struct-NB: predicting protein-RNA binding sites using structural features.
    Towfic F; Caragea C; Gemperline DC; Dobbs D; Honavar V
    Int J Data Min Bioinform; 2010; 4(1):21-43. PubMed ID: 20300450
    [TBL] [Abstract][Full Text] [Related]  

  • 9. PRINTR: prediction of RNA binding sites in proteins using SVM and profiles.
    Wang Y; Xue Z; Shen G; Xu J
    Amino Acids; 2008 Aug; 35(2):295-302. PubMed ID: 18235992
    [TBL] [Abstract][Full Text] [Related]  

  • 10. RNA-binding residues prediction using structural features.
    Ren H; Shen Y
    BMC Bioinformatics; 2015 Aug; 16():249. PubMed ID: 26254826
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Prediction of RNA-binding residues in proteins from primary sequence using an enriched random forest model with a novel hybrid feature.
    Ma X; Guo J; Wu J; Liu H; Yu J; Xie J; Sun X
    Proteins; 2011 Apr; 79(4):1230-9. PubMed ID: 21268114
    [TBL] [Abstract][Full Text] [Related]  

  • 12. DRBpred: A sequence-based machine learning method to effectively predict DNA- and RNA-binding residues.
    Kabir MWU; Alawad DM; Pokhrel P; Hoque MT
    Comput Biol Med; 2024 Mar; 170():108081. PubMed ID: 38295475
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A boosting approach for prediction of protein-RNA binding residues.
    Tang Y; Liu D; Wang Z; Wen T; Deng L
    BMC Bioinformatics; 2017 Dec; 18(Suppl 13):465. PubMed ID: 29219069
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Integrated structural biology to unravel molecular mechanisms of protein-RNA recognition.
    Schlundt A; Tants JN; Sattler M
    Methods; 2017 Apr; 118-119():119-136. PubMed ID: 28315749
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Prediction of RNA-binding proteins by voting systems.
    Peng CR; Liu L; Niu B; Lv YL; Li MJ; Yuan YL; Zhu YB; Lu WC; Cai YD
    J Biomed Biotechnol; 2011; 2011():506205. PubMed ID: 21826121
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Efficient mapping of RNA-binding residues in RNA-binding proteins using local sequence features of binding site residues in protein-RNA complexes.
    Agarwal A; Kant S; Bahadur RP
    Proteins; 2023 Sep; 91(9):1361-1379. PubMed ID: 37254800
    [TBL] [Abstract][Full Text] [Related]  

  • 17. RNA recognition by transcriptional antiterminators of the BglG/SacY family: mapping of SacY RNA binding site.
    Declerck N; Minh NL; Yang Y; Bloch V; Kochoyan M; Aymerich S
    J Mol Biol; 2002 Jun; 319(5):1035-48. PubMed ID: 12079345
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Prediction of RNA binding sites in a protein using SVM and PSSM profile.
    Kumar M; Gromiha MM; Raghava GP
    Proteins; 2008 Apr; 71(1):189-94. PubMed ID: 17932917
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Improve the prediction of RNA-binding residues using structural neighbours.
    Li Q; Cao Z; Liu H
    Protein Pept Lett; 2010 Mar; 17(3):287-96. PubMed ID: 19508202
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Comprehensive review and empirical analysis of hallmarks of DNA-, RNA- and protein-binding residues in protein chains.
    Zhang J; Ma Z; Kurgan L
    Brief Bioinform; 2019 Jul; 20(4):1250-1268. PubMed ID: 29253082
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.