231 related articles for article (PubMed ID: 21224286)
1. GPU accelerated biochemical network simulation.
Zhou Y; Liepe J; Sheng X; Stumpf MP; Barnes C
Bioinformatics; 2011 Mar; 27(6):874-6. PubMed ID: 21224286
[TBL] [Abstract][Full Text] [Related]
2. LASSIE: simulating large-scale models of biochemical systems on GPUs.
Tangherloni A; Nobile MS; Besozzi D; Mauri G; Cazzaniga P
BMC Bioinformatics; 2017 May; 18(1):246. PubMed ID: 28486952
[TBL] [Abstract][Full Text] [Related]
3. Exploiting graphics processing units for computational biology and bioinformatics.
Payne JL; Sinnott-Armstrong NA; Moore JH
Interdiscip Sci; 2010 Sep; 2(3):213-20. PubMed ID: 20658333
[TBL] [Abstract][Full Text] [Related]
4. GAMUT: GPU accelerated microRNA analysis to uncover target genes through CUDA-miRanda.
Wang S; Kim J; Jiang X; Brunner SF; Ohno-Machado L
BMC Med Genomics; 2014; 7 Suppl 1(Suppl 1):S9. PubMed ID: 25077821
[TBL] [Abstract][Full Text] [Related]
5. Graphics processing units in bioinformatics, computational biology and systems biology.
Nobile MS; Cazzaniga P; Tangherloni A; Besozzi D
Brief Bioinform; 2017 Sep; 18(5):870-885. PubMed ID: 27402792
[TBL] [Abstract][Full Text] [Related]
6. Massive exploration of perturbed conditions of the blood coagulation cascade through GPU parallelization.
Cazzaniga P; Nobile MS; Besozzi D; Bellini M; Mauri G
Biomed Res Int; 2014; 2014():863298. PubMed ID: 25025072
[TBL] [Abstract][Full Text] [Related]
7. Simulation of P systems with active membranes on CUDA.
Cecilia JM; García JM; Guerrero GD; Martínez-del-Amor MA; Pérez-Hurtado I; Pérez-Jiménez MJ
Brief Bioinform; 2010 May; 11(3):313-22. PubMed ID: 20038568
[TBL] [Abstract][Full Text] [Related]
8. GPU computing for systems biology.
Dematté L; Prandi D
Brief Bioinform; 2010 May; 11(3):323-33. PubMed ID: 20211843
[TBL] [Abstract][Full Text] [Related]
9. Accelerating Wright-Fisher Forward Simulations on the Graphics Processing Unit.
Lawrie DS
G3 (Bethesda); 2017 Sep; 7(9):3229-3236. PubMed ID: 28768689
[TBL] [Abstract][Full Text] [Related]
10. NMF-mGPU: non-negative matrix factorization on multi-GPU systems.
Mejía-Roa E; Tabas-Madrid D; Setoain J; García C; Tirado F; Pascual-Montano A
BMC Bioinformatics; 2015 Feb; 16():43. PubMed ID: 25887585
[TBL] [Abstract][Full Text] [Related]
11. High performance hybrid functional Petri net simulations of biological pathway models on CUDA.
Chalkidis G; Nagasaki M; Miyano S
IEEE/ACM Trans Comput Biol Bioinform; 2011; 8(6):1545-56. PubMed ID: 21116036
[TBL] [Abstract][Full Text] [Related]
12. Large-scale neural circuit mapping data analysis accelerated with the graphical processing unit (GPU).
Shi Y; Veidenbaum AV; Nicolau A; Xu X
J Neurosci Methods; 2015 Jan; 239():1-10. PubMed ID: 25277633
[TBL] [Abstract][Full Text] [Related]
13. Comparison of GPU- and CPU-implementations of mean-firing rate neural networks on parallel hardware.
Dinkelbach HÜ; Vitay J; Beuth F; Hamker FH
Network; 2012; 23(4):212-36. PubMed ID: 23140422
[TBL] [Abstract][Full Text] [Related]
14. Efficient estimation of bounded gradient-drift diffusion models for affect on CPU and GPU.
Loossens T; Meers K; Vanhasbroeck N; Anarat N; Verdonck S; Tuerlinckx F
Behav Res Methods; 2022 Jun; 54(3):1428-1443. PubMed ID: 34561819
[TBL] [Abstract][Full Text] [Related]
15. A fast forward projection using multithreads for multirays on GPUs in medical image reconstruction.
Chou CY; Chuo YY; Hung Y; Wang W
Med Phys; 2011 Jul; 38(7):4052-65. PubMed ID: 21859004
[TBL] [Abstract][Full Text] [Related]
16. The FLAME-accelerated signalling tool (FaST) for facile parallelisation of flexible agent-based models of cell signalling.
Fullstone G; Guttà C; Beyer A; Rehm M
NPJ Syst Biol Appl; 2020 Apr; 6(1):10. PubMed ID: 32313030
[TBL] [Abstract][Full Text] [Related]
17. FUX-Sim: Implementation of a fast universal simulation/reconstruction framework for X-ray systems.
Abella M; Serrano E; Garcia-Blas J; García I; de Molina C; Carretero J; Desco M
PLoS One; 2017; 12(7):e0180363. PubMed ID: 28692677
[TBL] [Abstract][Full Text] [Related]
18. High performance computing for deformable image registration: towards a new paradigm in adaptive radiotherapy.
Samant SS; Xia J; Muyan-Ozcelik P; Owens JD
Med Phys; 2008 Aug; 35(8):3546-53. PubMed ID: 18777915
[TBL] [Abstract][Full Text] [Related]
19. Accelerated parallel algorithm for gene network reverse engineering.
He J; Zhou Z; Reed M; Califano A
BMC Syst Biol; 2017 Sep; 11(Suppl 4):83. PubMed ID: 28950860
[TBL] [Abstract][Full Text] [Related]
20. MrBayes on a graphics processing unit.
Zhou J; Liu X; Stones DS; Xie Q; Wang G
Bioinformatics; 2011 May; 27(9):1255-61. PubMed ID: 21414986
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
