185 related articles for article (PubMed ID: 21239590)
1. Core and panmetabolism in Escherichia coli.
Vieira G; Sabarly V; Bourguignon PY; Durot M; Le Fèvre F; Mornico D; Vallenet D; Bouvet O; Denamur E; Schachter V; Médigue C
J Bacteriol; 2011 Mar; 193(6):1461-72. PubMed ID: 21239590
[TBL] [Abstract][Full Text] [Related]
2. The evolution of metabolic networks of E. coli.
Baumler DJ; Peplinski RG; Reed JL; Glasner JD; Perna NT
BMC Syst Biol; 2011 Nov; 5():182. PubMed ID: 22044664
[TBL] [Abstract][Full Text] [Related]
3. Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments.
Monk JM; Charusanti P; Aziz RK; Lerman JA; Premyodhin N; Orth JD; Feist AM; Palsson BØ
Proc Natl Acad Sci U S A; 2013 Dec; 110(50):20338-43. PubMed ID: 24277855
[TBL] [Abstract][Full Text] [Related]
4. Metabolic modeling of common Escherichia coli strains in human gut microbiome.
Gao YD; Zhao Y; Huang J
Biomed Res Int; 2014; 2014():694967. PubMed ID: 25126572
[TBL] [Abstract][Full Text] [Related]
5. Extensive genomic diversity in pathogenic Escherichia coli and Shigella Strains revealed by comparative genomic hybridization microarray.
Fukiya S; Mizoguchi H; Tobe T; Mori H
J Bacteriol; 2004 Jun; 186(12):3911-21. PubMed ID: 15175305
[TBL] [Abstract][Full Text] [Related]
6. Probabilistic integrative modeling of genome-scale metabolic and regulatory networks in Escherichia coli and Mycobacterium tuberculosis.
Chandrasekaran S; Price ND
Proc Natl Acad Sci U S A; 2010 Oct; 107(41):17845-50. PubMed ID: 20876091
[TBL] [Abstract][Full Text] [Related]
7. Molecular evolution of the nicotinic acid requirement within the Shigella/EIEC pathotype.
Di Martino ML; Fioravanti R; Barbabella G; Prosseda G; Colonna B; Casalino M
Int J Med Microbiol; 2013 Dec; 303(8):651-61. PubMed ID: 24120364
[TBL] [Abstract][Full Text] [Related]
8. Genome analysis and in vivo virulence of porcine extraintestinal pathogenic Escherichia coli strain PCN033.
Liu C; Zheng H; Yang M; Xu Z; Wang X; Wei L; Tang B; Liu F; Zhang Y; Ding Y; Tang X; Wu B; Johnson TJ; Chen H; Tan C
BMC Genomics; 2015 Sep; 16(1):717. PubMed ID: 26391348
[TBL] [Abstract][Full Text] [Related]
9. Analysis of genome plasticity in pathogenic and commensal Escherichia coli isolates by use of DNA arrays.
Dobrindt U; Agerer F; Michaelis K; Janka A; Buchrieser C; Samuelson M; Svanborg C; Gottschalk G; Karch H; Hacker J
J Bacteriol; 2003 Mar; 185(6):1831-40. PubMed ID: 12618447
[TBL] [Abstract][Full Text] [Related]
10. Genome-scale metabolic network reconstructions of diverse
Monk JM
Philos Trans R Soc Lond B Biol Sci; 2022 Oct; 377(1861):20210236. PubMed ID: 35989599
[TBL] [Abstract][Full Text] [Related]
11. Flux-based hierarchical organization of Escherichia coli's metabolic network.
Robaina-Estévez S; Nikoloski Z
PLoS Comput Biol; 2020 Apr; 16(4):e1007832. PubMed ID: 32310959
[TBL] [Abstract][Full Text] [Related]
12. Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns.
Kaleta C; de Figueiredo LF; Schuster S
Genome Res; 2009 Oct; 19(10):1872-83. PubMed ID: 19541909
[TBL] [Abstract][Full Text] [Related]
13. Flux coupling analysis of metabolic networks is sensitive to missing reactions.
Marashi SA; Bockmayr A
Biosystems; 2011 Jan; 103(1):57-66. PubMed ID: 20888889
[TBL] [Abstract][Full Text] [Related]
14. The decoupling between genetic structure and metabolic phenotypes in Escherichia coli leads to continuous phenotypic diversity.
Sabarly V; Bouvet O; Glodt J; Clermont O; Skurnik D; Diancourt L; de Vienne D; Denamur E; Dillmann C
J Evol Biol; 2011 Jul; 24(7):1559-71. PubMed ID: 21569155
[TBL] [Abstract][Full Text] [Related]
15. Sequence-based Network Completion Reveals the Integrality of Missing Reactions in Metabolic Networks.
Krumholz EW; Libourel IG
J Biol Chem; 2015 Jul; 290(31):19197-207. PubMed ID: 26041773
[TBL] [Abstract][Full Text] [Related]
16. Uropathogenic Escherichia coli pathogenicity islands and other ExPEC virulence genes may contribute to the genome variability of enteroinvasive E. coli.
da Silva LC; de Mello Santos AC; Silva RM
BMC Microbiol; 2017 Mar; 17(1):68. PubMed ID: 28302076
[TBL] [Abstract][Full Text] [Related]
17. Genome-Based Comparison of Cyclic Di-GMP Signaling in Pathogenic and Commensal Escherichia coli Strains.
Povolotsky TL; Hengge R
J Bacteriol; 2016 Jan; 198(1):111-26. PubMed ID: 26303830
[TBL] [Abstract][Full Text] [Related]
18. Mapping the landscape of metabolic goals of a cell.
Zhao Q; Stettner AI; Reznik E; Paschalidis ICh; Segrè D
Genome Biol; 2016 May; 17(1):109. PubMed ID: 27215445
[TBL] [Abstract][Full Text] [Related]
19. Exploiting the pathway structure of metabolism to reveal high-order epistasis.
Imielinski M; Belta C
BMC Syst Biol; 2008 Apr; 2():40. PubMed ID: 18447928
[TBL] [Abstract][Full Text] [Related]
20. Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks.
Prigent S; Frioux C; Dittami SM; Thiele S; Larhlimi A; Collet G; Gutknecht F; Got J; Eveillard D; Bourdon J; Plewniak F; Tonon T; Siegel A
PLoS Comput Biol; 2017 Jan; 13(1):e1005276. PubMed ID: 28129330
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
