BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

377 related articles for article (PubMed ID: 21247443)

  • 1. Identification of fusion genes in breast cancer by paired-end RNA-sequencing.
    Edgren H; Murumagi A; Kangaspeska S; Nicorici D; Hongisto V; Kleivi K; Rye IH; Nyberg S; Wolf M; Borresen-Dale AL; Kallioniemi O
    Genome Biol; 2011; 12(1):R6. PubMed ID: 21247443
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Identification of gene fusion transcripts by transcriptome sequencing in BRCA1-mutated breast cancers and cell lines.
    Ha KC; Lalonde E; Li L; Cavallone L; Natrajan R; Lambros MB; Mitsopoulos C; Hakas J; Kozarewa I; Fenwick K; Lord CJ; Ashworth A; Vincent-Salomon A; Basik M; Reis-Filho JS; Majewski J; Foulkes WD
    BMC Med Genomics; 2011 Oct; 4():75. PubMed ID: 22032724
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Reanalysis of RNA-sequencing data reveals several additional fusion genes with multiple isoforms.
    Kangaspeska S; Hultsch S; Edgren H; Nicorici D; Murumägi A; Kallioniemi O
    PLoS One; 2012; 7(10):e48745. PubMed ID: 23119097
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Genomic hotspots but few recurrent fusion genes in breast cancer.
    Fimereli D; Fumagalli D; Brown D; Gacquer D; Rothé F; Salgado R; Larsimont D; Sotiriou C; Detours V
    Genes Chromosomes Cancer; 2018 Jul; 57(7):331-338. PubMed ID: 29436103
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Gene fusions associated with recurrent amplicons represent a class of passenger aberrations in breast cancer.
    Kalyana-Sundaram S; Shankar S; Deroo S; Iyer MK; Palanisamy N; Chinnaiyan AM; Kumar-Sinha C
    Neoplasia; 2012 Aug; 14(8):702-8. PubMed ID: 22952423
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Characterization of the genomic features and expressed fusion genes in micropapillary carcinomas of the breast.
    Natrajan R; Wilkerson PM; Marchiò C; Piscuoglio S; Ng CK; Wai P; Lambros MB; Samartzis EP; Dedes KJ; Frankum J; Bajrami I; Kopec A; Mackay A; A'hern R; Fenwick K; Kozarewa I; Hakas J; Mitsopoulos C; Hardisson D; Lord CJ; Kumar-Sinha C; Ashworth A; Weigelt B; Sapino A; Chinnaiyan AM; Maher CA; Reis-Filho JS
    J Pathol; 2014 Apr; 232(5):553-65. PubMed ID: 24395524
    [TBL] [Abstract][Full Text] [Related]  

  • 7. FuGePrior: A novel gene fusion prioritization algorithm based on accurate fusion structure analysis in cancer RNA-seq samples.
    Paciello G; Ficarra E
    BMC Bioinformatics; 2017 Jan; 18(1):58. PubMed ID: 28114882
    [TBL] [Abstract][Full Text] [Related]  

  • 8. deFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data.
    McPherson A; Hormozdiari F; Zayed A; Giuliany R; Ha G; Sun MG; Griffith M; Heravi Moussavi A; Senz J; Melnyk N; Pacheco M; Marra MA; Hirst M; Nielsen TO; Sahinalp SC; Huntsman D; Shah SP
    PLoS Comput Biol; 2011 May; 7(5):e1001138. PubMed ID: 21625565
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Integrative analysis of oncogenic fusion genes and their functional impact in colorectal cancer.
    Choi Y; Kwon CH; Lee SJ; Park J; Shin JY; Park DY
    Br J Cancer; 2018 Jul; 119(2):230-240. PubMed ID: 29955133
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Identification of differentially expressed genes and typical fusion genes associated with three subtypes of breast cancer.
    Wang R; Li J; Yin C; Zhao D; Yin L
    Breast Cancer; 2019 May; 26(3):305-316. PubMed ID: 30446971
    [TBL] [Abstract][Full Text] [Related]  

  • 11. FusionQ: a novel approach for gene fusion detection and quantification from paired-end RNA-Seq.
    Liu C; Ma J; Chang CJ; Zhou X
    BMC Bioinformatics; 2013 Jun; 14():193. PubMed ID: 23768108
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Development and Verification of an RNA Sequencing (RNA-Seq) Assay for the Detection of Gene Fusions in Tumors.
    Winters JL; Davila JI; McDonald AM; Nair AA; Fadra N; Wehrs RN; Thomas BC; Balcom JR; Jin L; Wu X; Voss JS; Klee EW; Oliver GR; Graham RP; Neff JL; Rumilla KM; Aypar U; Kipp BR; Jenkins RB; Jen J; Halling KC
    J Mol Diagn; 2018 Jul; 20(4):495-511. PubMed ID: 29929942
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Involvement of DPP9 in gene fusions in serous ovarian carcinoma.
    Smebye ML; Agostini A; Johannessen B; Thorsen J; Davidson B; Tropé CG; Heim S; Skotheim RI; Micci F
    BMC Cancer; 2017 Sep; 17(1):642. PubMed ID: 28893231
    [TBL] [Abstract][Full Text] [Related]  

  • 14. GFusion: an Effective Algorithm to Identify Fusion Genes from Cancer RNA-Seq Data.
    Zhao J; Chen Q; Wu J; Han P; Song X
    Sci Rep; 2017 Jul; 7(1):6880. PubMed ID: 28761119
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The use of ultra-dense array CGH analysis for the discovery of micro-copy number alterations and gene fusions in the cancer genome.
    Przybytkowski E; Ferrario C; Basik M
    BMC Med Genomics; 2011 Jan; 4():16. PubMed ID: 21272361
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Overview of Fusion Detection Strategies Using Next-Generation Sequencing.
    Schröder J; Kumar A; Wong SQ
    Methods Mol Biol; 2019; 1908():125-138. PubMed ID: 30649725
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Open-access synthetic spike-in mRNA-seq data for cancer gene fusions.
    Tembe WD; Pond SJ; Legendre C; Chuang HY; Liang WS; Kim NE; Montel V; Wong S; McDaniel TK; Craig DW; Carpten JD
    BMC Genomics; 2014 Sep; 15(1):824. PubMed ID: 25266161
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Improved detection of clinically relevant fusion transcripts in cancer by machine learning classification.
    Hafstað V; Häkkinen J; Larsson M; Staaf J; Vallon-Christersson J; Persson H
    BMC Genomics; 2023 Dec; 24(1):783. PubMed ID: 38110872
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The differential diagnoses of uterine leiomyomas and leiomyosarcomas using DNA and RNA sequencing.
    Mas A; Alonso R; Garrido-Gómez T; Escorcia P; Montero B; Jiménez-Almazán J; Martín J; Pellicer N; Monleón J; Simón C
    Am J Obstet Gynecol; 2019 Oct; 221(4):320.e1-320.e23. PubMed ID: 31121144
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Fusion genes with ALK as recurrent partner in ependymoma-like gliomas: a new brain tumor entity?
    Olsen TK; Panagopoulos I; Meling TR; Micci F; Gorunova L; Thorsen J; Due-Tønnessen B; Scheie D; Lund-Iversen M; Krossnes B; Saxhaug C; Heim S; Brandal P
    Neuro Oncol; 2015 Oct; 17(10):1365-73. PubMed ID: 25795305
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 19.