65 related articles for article (PubMed ID: 21310488)
1. A bioinformatics pipeline to build a knowledge database for in silico antibody engineering.
Zhao S; Lu J
Mol Immunol; 2011 Apr; 48(8):1019-26. PubMed ID: 21310488
[TBL] [Abstract][Full Text] [Related]
2. Chickens, more than humans, focus the diversity of their immunoglobulin genes on the complementarity-determining region but utilise amino acids, indicative of a more cross-reactive antibody repertoire.
Mallaby J; Ng J; Stewart A; Sinclair E; Dunn-Walters D; Hershberg U
Front Immunol; 2022; 13():837246. PubMed ID: 36569888
[TBL] [Abstract][Full Text] [Related]
3. A window into the human immune system: comprehensive characterization of the complexity of antibody complementary-determining regions in functional antibodies.
Mejias-Gomez O; Madsen AV; Skovgaard K; Pedersen LE; Morth JP; Jenkins TP; Kristensen P; Goletz S
MAbs; 2023; 15(1):2268255. PubMed ID: 37876265
[TBL] [Abstract][Full Text] [Related]
4. Human germline antibody gene segments encode polyspecific antibodies.
Willis JR; Briney BS; DeLuca SL; Crowe JE; Meiler J
PLoS Comput Biol; 2013 Apr; 9(4):e1003045. PubMed ID: 23637590
[TBL] [Abstract][Full Text] [Related]
5. The human antibody sequence space and structural design of the V, J regions, and CDRH3 with Rosetta.
Schmitz S; Schmitz EA; Crowe JE; Meiler J
MAbs; 2022; 14(1):2068212. PubMed ID: 35544469
[TBL] [Abstract][Full Text] [Related]
6. IgLM: Infilling language modeling for antibody sequence design.
Shuai RW; Ruffolo JA; Gray JJ
Cell Syst; 2023 Nov; 14(11):979-989.e4. PubMed ID: 37909045
[TBL] [Abstract][Full Text] [Related]
7. Germline-Encoded Positional Cysteine Polymorphisms Enhance Diversity in Antibody Ultralong CDR H3 Regions.
Jenkins GW; Safonova Y; Smider VV
J Immunol; 2022 Dec; 209(11):2141-2148. PubMed ID: 36426974
[TBL] [Abstract][Full Text] [Related]
8. Looking for therapeutic antibodies in next-generation sequencing repositories.
Krawczyk K; Raybould MIJ; Kovaltsuk A; Deane CM
MAbs; 2019 Oct; 11(7):1197-1205. PubMed ID: 31216939
[TBL] [Abstract][Full Text] [Related]
9. Toward real-world automated antibody design with combinatorial Bayesian optimization.
Khan A; Cowen-Rivers AI; Grosnit A; Deik DG; Robert PA; Greiff V; Smorodina E; Rawat P; Akbar R; Dreczkowski K; Tutunov R; Bou-Ammar D; Wang J; Storkey A; Bou-Ammar H
Cell Rep Methods; 2023 Jan; 3(1):100374. PubMed ID: 36814835
[TBL] [Abstract][Full Text] [Related]
10. A comparison of human and macaque (Macaca mulatta) immunoglobulin germline V regions and its implications for antibody engineering.
Thullier P; Chahboun S; Pelat T
MAbs; 2010; 2(5):528-38. PubMed ID: 20562531
[TBL] [Abstract][Full Text] [Related]
11. ARMADiLLO: a web server for analyzing antibody mutation probabilities.
Martin Beem JS; Venkatayogi S; Haynes BF; Wiehe K
Nucleic Acids Res; 2023 Jul; 51(W1):W51-W56. PubMed ID: 37260077
[TBL] [Abstract][Full Text] [Related]
12. Protein design and variant prediction using autoregressive generative models.
Shin JE; Riesselman AJ; Kollasch AW; McMahon C; Simon E; Sander C; Manglik A; Kruse AC; Marks DS
Nat Commun; 2021 Apr; 12(1):2403. PubMed ID: 33893299
[TBL] [Abstract][Full Text] [Related]
13. Design of Antigen-Specific Antibody CDRH3 Sequences Using AI and Germline-Based Templates.
Marinov TM; Abu-Shmais AA; Janke AK; Georgiev IS
bioRxiv; 2024 Mar; ():. PubMed ID: 38562698
[TBL] [Abstract][Full Text] [Related]
14. Structural Survey of Antigen Recognition by Synthetic Human Antibodies.
Gorelik M; Miersch S; Sidhu SS
Cold Spring Harb Protoc; 2024 Apr; ():. PubMed ID: 38594044
[TBL] [Abstract][Full Text] [Related]
15. Structure guided homology model based design and engineering of mouse antibodies for humanization.
Kurella VB; Gali R
Bioinformation; 2014; 10(4):180-6. PubMed ID: 24966517
[TBL] [Abstract][Full Text] [Related]
16. An integrated technology for quantitative wide mutational scanning of human antibody Fab libraries.
Petersen BM; Kirby MB; Chrispens KM; Irvin OM; Strawn IK; Haas CM; Walker AM; Baumer ZT; Ulmer SA; Ayala E; Rhodes ER; Guthmiller JJ; Steiner PJ; Whitehead TA
bioRxiv; 2024 Jan; ():. PubMed ID: 38293170
[TBL] [Abstract][Full Text] [Related]
17. Single-chain dimers from de novo immunoglobulins as robust scaffolds for multiple binding loops.
Roel-Touris J; Nadal M; Marcos E
Nat Commun; 2023 Sep; 14(1):5939. PubMed ID: 37741853
[TBL] [Abstract][Full Text] [Related]
18. AbDPP: Target-oriented antibody design with pretraining and prior biological structure knowledge.
Yu C; Lin X; Cheng Y; Xu J; Wang H; Yan Y; Huang Y; Liu L; Zhao W; Zhao Q; Wang J; Zhang L
Proteins; 2024 Mar; ():. PubMed ID: 38441337
[TBL] [Abstract][Full Text] [Related]
19. The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody sequences and structures.
Abanades B; Olsen TH; Raybould MIJ; Aguilar-Sanjuan B; Wong WK; Georges G; Bujotzek A; Deane CM
Nucleic Acids Res; 2024 Jan; 52(D1):D545-D551. PubMed ID: 37971316
[TBL] [Abstract][Full Text] [Related]
20. A Computational Design Pipeline to Fabricate Sensing Network Physicalizations.
Bae SS; Fujiwara T; Ynnerman A; Do EY; Rivera ML; Szafir DA
IEEE Trans Vis Comput Graph; 2024 Jan; 30(1):913-923. PubMed ID: 37906495
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
