163 related articles for article (PubMed ID: 21324149)
1. Characterization of statistical features for plant microRNA prediction.
Thakur V; Wanchana S; Xu M; Bruskiewich R; Quick WP; Mosig A; Zhu XG
BMC Genomics; 2011 Feb; 12():108. PubMed ID: 21324149
[TBL] [Abstract][Full Text] [Related]
2. MaturePred: efficient identification of microRNAs within novel plant pre-miRNAs.
Xuan P; Guo M; Huang Y; Li W; Huang Y
PLoS One; 2011; 6(11):e27422. PubMed ID: 22110646
[TBL] [Abstract][Full Text] [Related]
3. miRPlant: an integrated tool for identification of plant miRNA from RNA sequencing data.
An J; Lai J; Sajjanhar A; Lehman ML; Nelson CC
BMC Bioinformatics; 2014 Aug; 15(1):275. PubMed ID: 25117656
[TBL] [Abstract][Full Text] [Related]
4. PlantMiRNAPred: efficient classification of real and pseudo plant pre-miRNAs.
Xuan P; Guo M; Liu X; Huang Y; Li W; Huang Y
Bioinformatics; 2011 May; 27(10):1368-76. PubMed ID: 21441575
[TBL] [Abstract][Full Text] [Related]
5. plantMirP: an efficient computational program for the prediction of plant pre-miRNA by incorporating knowledge-based energy features.
Yao Y; Ma C; Deng H; Liu Q; Zhang J; Yi M
Mol Biosyst; 2016 Oct; 12(10):3124-31. PubMed ID: 27472470
[TBL] [Abstract][Full Text] [Related]
6. Conservation and divergence of plant microRNA genes.
Zhang B; Pan X; Cannon CH; Cobb GP; Anderson TA
Plant J; 2006 Apr; 46(2):243-59. PubMed ID: 16623887
[TBL] [Abstract][Full Text] [Related]
7. Bioinformatics Study of Structural Patterns in Plant MicroRNA Precursors.
Miskiewicz J; Tomczyk K; Mickiewicz A; Sarzynska J; Szachniuk M
Biomed Res Int; 2017; 2017():6783010. PubMed ID: 28280737
[TBL] [Abstract][Full Text] [Related]
8. Computational prediction of the localization of microRNAs within their pre-miRNA.
Leclercq M; Diallo AB; Blanchette M
Nucleic Acids Res; 2013 Aug; 41(15):7200-11. PubMed ID: 23748953
[TBL] [Abstract][Full Text] [Related]
9. Diversity, expression and mRNA targeting abilities of Argonaute-targeting miRNAs among selected vascular plants.
Jagtap S; Shivaprasad PV
BMC Genomics; 2014 Dec; 15(1):1049. PubMed ID: 25443390
[TBL] [Abstract][Full Text] [Related]
10. Classification of real and pseudo microRNA precursors using local structure-sequence features and support vector machine.
Xue C; Li F; He T; Liu GP; Li Y; Zhang X
BMC Bioinformatics; 2005 Dec; 6():310. PubMed ID: 16381612
[TBL] [Abstract][Full Text] [Related]
11. A computational-based update on microRNAs and their targets in barley (Hordeum vulgare L.).
Colaiacovo M; Subacchi A; Bagnaresi P; Lamontanara A; Cattivelli L; Faccioli P
BMC Genomics; 2010 Oct; 11():595. PubMed ID: 20969764
[TBL] [Abstract][Full Text] [Related]
12. miRNAFinder: A comprehensive web resource for plant Pre-microRNA classification.
Lokuge S; Jayasundara S; Ihalagedara P; Kahanda I; Herath D
Biosystems; 2022 Jun; 215-216():104662. PubMed ID: 35306049
[TBL] [Abstract][Full Text] [Related]
13. Are all the miRBase-registered microRNAs true? A structure- and expression-based re-examination in plants.
Meng Y; Shao C; Wang H; Chen M
RNA Biol; 2012 Mar; 9(3):249-53. PubMed ID: 22336711
[TBL] [Abstract][Full Text] [Related]
14. Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae).
Guzman F; Almerão MP; Korbes AP; Christoff AP; Zanella CM; Bered F; Margis R
Plant Sci; 2013 Sep; 210():214-23. PubMed ID: 23849128
[TBL] [Abstract][Full Text] [Related]
15. Dual coding of siRNAs and miRNAs by plant transposable elements.
Piriyapongsa J; Jordan IK
RNA; 2008 May; 14(5):814-21. PubMed ID: 18367716
[TBL] [Abstract][Full Text] [Related]
16. Target-align: a tool for plant microRNA target identification.
Xie F; Zhang B
Bioinformatics; 2010 Dec; 26(23):3002-3. PubMed ID: 20934992
[TBL] [Abstract][Full Text] [Related]
17. miRA: adaptable novel miRNA identification in plants using small RNA sequencing data.
Evers M; Huttner M; Dueck A; Meister G; Engelmann JC
BMC Bioinformatics; 2015 Nov; 16():370. PubMed ID: 26542525
[TBL] [Abstract][Full Text] [Related]
18. Identification of conserved and novel microRNAs in Catharanthus roseus by deep sequencing and computational prediction of their potential targets.
Prakash P; Ghosliya D; Gupta V
Gene; 2015 Jan; 554(2):181-95. PubMed ID: 25445288
[TBL] [Abstract][Full Text] [Related]
19. Computational prediction and experimental verification of miRNAs in Panicum miliaceum L.
Wu Y; Du J; Wang X; Fang X; Shan W; Liang Z
Sci China Life Sci; 2012 Sep; 55(9):807-17. PubMed ID: 23015130
[TBL] [Abstract][Full Text] [Related]
20. microRPM: a microRNA prediction model based only on plant small RNA sequencing data.
Tseng KC; Chiang-Hsieh YF; Pai H; Chow CN; Lee SC; Zheng HQ; Kuo PL; Li GZ; Hung YC; Lin NS; Chang WC
Bioinformatics; 2018 Apr; 34(7):1108-1115. PubMed ID: 29136092
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
