BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

545 related articles for article (PubMed ID: 21347257)

  • 1. Gene expression profiles from formalin fixed paraffin embedded breast cancer tissue are largely comparable to fresh frozen matched tissue.
    Mittempergher L; de Ronde JJ; Nieuwland M; Kerkhoven RM; Simon I; Rutgers EJ; Wessels LF; Van't Veer LJ
    PLoS One; 2011 Feb; 6(2):e17163. PubMed ID: 21347257
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Reliable gene expression profiling of formalin-fixed paraffin-embedded breast cancer tissue (FFPE) using cDNA-mediated annealing, extension, selection, and ligation whole-genome (DASL WG) assay.
    Iddawela M; Rueda OM; Klarqvist M; Graf S; Earl HM; Caldas C
    BMC Med Genomics; 2016 Aug; 9(1):54. PubMed ID: 27542606
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Analyses and interpretation of whole-genome gene expression from formalin-fixed paraffin-embedded tissue: an illustration with breast cancer tissues.
    Kibriya MG; Jasmine F; Roy S; Paul-Brutus RM; Argos M; Ahsan H
    BMC Genomics; 2010 Nov; 11():622. PubMed ID: 21059268
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Whole-genome gene expression profiling of formalin-fixed, paraffin-embedded tissue samples.
    April C; Klotzle B; Royce T; Wickham-Garcia E; Boyaniwsky T; Izzo J; Cox D; Jones W; Rubio R; Holton K; Matulonis U; Quackenbush J; Fan JB
    PLoS One; 2009 Dec; 4(12):e8162. PubMed ID: 19997620
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A Method to Correlate mRNA Expression Datasets Obtained from Fresh Frozen and Formalin-Fixed, Paraffin-Embedded Tissue Samples: A Matter of Thresholds.
    Mustafa DA; Sieuwerts AM; Smid M; de Weerd V; van der Weiden M; Meijer-van Gelder ME; Martens JW; Foekens JA; Kros JM
    PLoS One; 2015; 10(12):e0144097. PubMed ID: 26716838
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Clinical relevance of DNA microarray analyses using archival formalin-fixed paraffin-embedded breast cancer specimens.
    Sadi AM; Wang DY; Youngson BJ; Miller N; Boerner S; Done SJ; Leong WL
    BMC Cancer; 2011 Jun; 11():253:1-13. PubMed ID: 21679412
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Robust transcriptional tumor signatures applicable to both formalin-fixed paraffin-embedded and fresh-frozen samples.
    Chen R; Guan Q; Cheng J; He J; Liu H; Cai H; Hong G; Zhang J; Li N; Ao L; Guo Z
    Oncotarget; 2017 Jan; 8(4):6652-6662. PubMed ID: 28036264
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A methodological study of genome-wide DNA methylation analyses using matched archival formalin-fixed paraffin embedded and fresh frozen breast tumors.
    Espinal AC; Wang D; Yan L; Liu S; Tang L; Hu Q; Morrison CD; Ambrosone CB; Higgins MJ; Sucheston-Campbell LE
    Oncotarget; 2017 Feb; 8(9):14821-14829. PubMed ID: 28118602
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Next-generation sequencing of RNA and DNA isolated from paired fresh-frozen and formalin-fixed paraffin-embedded samples of human cancer and normal tissue.
    Hedegaard J; Thorsen K; Lund MK; Hein AM; Hamilton-Dutoit SJ; Vang S; Nordentoft I; Birkenkamp-Demtröder K; Kruhøffer M; Hager H; Knudsen B; Andersen CL; Sørensen KD; Pedersen JS; Ørntoft TF; Dyrskjøt L
    PLoS One; 2014; 9(5):e98187. PubMed ID: 24878701
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Gene expression profiles of gliomas in formalin-fixed paraffin-embedded material.
    Gravendeel LA; de Rooi JJ; Eilers PH; van den Bent MJ; Sillevis Smitt PA; French PJ
    Br J Cancer; 2012 Jan; 106(3):538-45. PubMed ID: 22187034
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Quantitative expression profiling in formalin-fixed paraffin-embedded samples by affymetrix microarrays.
    Abdueva D; Wing M; Schaub B; Triche T; Davicioni E
    J Mol Diagn; 2010 Jul; 12(4):409-17. PubMed ID: 20522636
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The impact of RNA extraction method on accurate RNA sequencing from formalin-fixed paraffin-embedded tissues.
    Marczyk M; Fu C; Lau R; Du L; Trevarton AJ; Sinn BV; Gould RE; Pusztai L; Hatzis C; Symmans WF
    BMC Cancer; 2019 Dec; 19(1):1189. PubMed ID: 31805884
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Gene expression profiling of formalin-fixed, paraffin-embedded familial breast tumours using the whole genome-DASL assay.
    Waddell N; Cocciardi S; Johnson J; Healey S; Marsh A; Riley J; da Silva L; Vargas AC; Reid L; ; Simpson PT; Lakhani SR; Chenevix-Trench G
    J Pathol; 2010 Aug; 221(4):452-61. PubMed ID: 20593485
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues.
    Webster AF; Zumbo P; Fostel J; Gandara J; Hester SD; Recio L; Williams A; Wood CE; Yauk CL; Mason CE
    Toxicol Sci; 2015 Dec; 148(2):460-72. PubMed ID: 26361796
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Quantitative determination of insulin-like growth factor 1 receptor mRNA in formalin-fixed paraffin-embedded tissues of invasive breast cancer.
    Fu P; Ibusuki M; Yamamoto Y; Yamamoto S; Fujiwara S; Murakami K; Zheng S; Iwase H
    Breast Cancer; 2012 Oct; 19(4):321-8. PubMed ID: 21990036
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Preparation of archival formalin-fixed paraffin-embedded mouse liver samples for use with the Agilent gene expression microarray platform.
    Jackson AF; Williams A; Moffat I; Phillips SL; Recio L; Waters MD; Lambert IB; Yauk CL
    J Pharmacol Toxicol Methods; 2013; 68(2):260-268. PubMed ID: 23458726
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Comparison of triple-negative breast cancer molecular subtyping using RNA from matched fresh-frozen versus formalin-fixed paraffin-embedded tissue.
    Jovanović B; Sheng Q; Seitz RS; Lawrence KD; Morris SW; Thomas LR; Hout DR; Schweitzer BL; Guo Y; Pietenpol JA; Lehmann BD
    BMC Cancer; 2017 Apr; 17(1):241. PubMed ID: 28376728
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Integrative analysis of copy number and gene expression in breast cancer using formalin-fixed paraffin-embedded core biopsy tissue: a feasibility study.
    Iddawela M; Rueda O; Eremin J; Eremin O; Cowley J; Earl HM; Caldas C
    BMC Genomics; 2017 Jul; 18(1):526. PubMed ID: 28697743
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Interpretation of genome-wide infinium methylation data from ligated DNA in formalin-fixed, paraffin-embedded paired tumor and normal tissue.
    Jasmine F; Rahaman R; Roy S; Raza M; Paul R; Rakibuz-Zaman M; Paul-Brutus R; Dodsworth C; Kamal M; Ahsan H; Kibriya MG
    BMC Res Notes; 2012 Feb; 5():117. PubMed ID: 22357164
    [TBL] [Abstract][Full Text] [Related]  

  • 20. mRNA-seq whole transcriptome profiling of fresh frozen versus archived fixed tissues.
    Bossel Ben-Moshe N; Gilad S; Perry G; Benjamin S; Balint-Lahat N; Pavlovsky A; Halperin S; Markus B; Yosepovich A; Barshack I; Gal-Yam EN; Domany E; Kaufman B; Dadiani M
    BMC Genomics; 2018 May; 19(1):419. PubMed ID: 29848287
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 28.