158 related articles for article (PubMed ID: 21349867)
1. Interactive, multiscale navigation of large and complicated biological networks.
Praneenararat T; Takagi T; Iwasaki W
Bioinformatics; 2011 Apr; 27(8):1121-7. PubMed ID: 21349867
[TBL] [Abstract][Full Text] [Related]
2. Integration of interactive, multi-scale network navigation approach with Cytoscape for functional genomics in the big data era.
Praneenararat T; Takagi T; Iwasaki W
BMC Genomics; 2012; 13 Suppl 7(Suppl 7):S24. PubMed ID: 23281970
[TBL] [Abstract][Full Text] [Related]
3. Graphlet-based edge clustering reveals pathogen-interacting proteins.
Solava RW; Michaels RP; Milenkovic T
Bioinformatics; 2012 Sep; 28(18):i480-i486. PubMed ID: 22962470
[TBL] [Abstract][Full Text] [Related]
4. PathSys: integrating molecular interaction graphs for systems biology.
Baitaluk M; Qian X; Godbole S; Raval A; Ray A; Gupta A
BMC Bioinformatics; 2006 Feb; 7():55. PubMed ID: 16464251
[TBL] [Abstract][Full Text] [Related]
5. NetSets.js: a JavaScript framework for compositional assessment and comparison of biological networks through Venn-integrated network diagrams.
Nagpal S; Kuntal BK; Mande SS
Bioinformatics; 2021 May; 37(4):580-582. PubMed ID: 32805035
[TBL] [Abstract][Full Text] [Related]
6. YETI: Yeast Exploration Tool Integrator.
Orton RJ; Sellers WI; Gerloff DL
Bioinformatics; 2004 Jan; 20(2):284-5. PubMed ID: 14734325
[TBL] [Abstract][Full Text] [Related]
7. L-GRAAL: Lagrangian graphlet-based network aligner.
Malod-Dognin N; Pržulj N
Bioinformatics; 2015 Jul; 31(13):2182-9. PubMed ID: 25725498
[TBL] [Abstract][Full Text] [Related]
8. Modular organization of protein interaction networks.
Luo F; Yang Y; Chen CF; Chang R; Zhou J; Scheuermann RH
Bioinformatics; 2007 Jan; 23(2):207-14. PubMed ID: 17092991
[TBL] [Abstract][Full Text] [Related]
9. Detecting non-uniform clusters in large-scale interaction graphs.
Levtov N; Amberkar S; Frenkel ZM; Kaderali L; Volkovich Z
J Comput Biol; 2014 Feb; 21(2):173-83. PubMed ID: 24050498
[TBL] [Abstract][Full Text] [Related]
10. Identifying functional modules in interaction networks through overlapping Markov clustering.
Shih YK; Parthasarathy S
Bioinformatics; 2012 Sep; 28(18):i473-i479. PubMed ID: 22962469
[TBL] [Abstract][Full Text] [Related]
11. Graphle: Interactive exploration of large, dense graphs.
Huttenhower C; Mehmood SO; Troyanskaya OG
BMC Bioinformatics; 2009 Dec; 10():417. PubMed ID: 20003429
[TBL] [Abstract][Full Text] [Related]
12. cMapper: gene-centric connectivity mapper for EBI-RDF platform.
Shoaib M; Ansari AA; Ahn SM
Bioinformatics; 2017 Jan; 33(2):266-271. PubMed ID: 27667790
[TBL] [Abstract][Full Text] [Related]
13. Detection of locally over-represented GO terms in protein-protein interaction networks.
Lavallée-Adam M; Coulombe B; Blanchette M
J Comput Biol; 2010 Mar; 17(3):443-57. PubMed ID: 20377456
[TBL] [Abstract][Full Text] [Related]
14. NETAL: a new graph-based method for global alignment of protein-protein interaction networks.
Neyshabur B; Khadem A; Hashemifar S; Arab SS
Bioinformatics; 2013 Jul; 29(13):1654-62. PubMed ID: 23696650
[TBL] [Abstract][Full Text] [Related]
15. Evolutionary Graph Clustering for Protein Complex Identification.
He T; Chan KCC
IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(3):892-904. PubMed ID: 28029628
[TBL] [Abstract][Full Text] [Related]
16. JNets: exploring networks by integrating annotation.
Macpherson JI; Pinney JW; Robertson DL
BMC Bioinformatics; 2009 Mar; 10():95. PubMed ID: 19323810
[TBL] [Abstract][Full Text] [Related]
17. Visualization of protein interaction networks: problems and solutions.
Agapito G; Guzzi PH; Cannataro M
BMC Bioinformatics; 2013; 14 Suppl 1(Suppl 1):S1. PubMed ID: 23368786
[TBL] [Abstract][Full Text] [Related]
18. Integrated analysis of multiple data sources reveals modular structure of biological networks.
Lu H; Shi B; Wu G; Zhang Y; Zhu X; Zhang Z; Liu C; Zhao Y; Wu T; Wang J; Chen R
Biochem Biophys Res Commun; 2006 Jun; 345(1):302-9. PubMed ID: 16690033
[TBL] [Abstract][Full Text] [Related]
19. RedNemo: topology-based PPI network reconstruction via repeated diffusion with neighborhood modifications.
Alkan F; Erten C
Bioinformatics; 2017 Feb; 33(4):537-544. PubMed ID: 27797764
[TBL] [Abstract][Full Text] [Related]
20. Detecting functional modules in the yeast protein-protein interaction network.
Chen J; Yuan B
Bioinformatics; 2006 Sep; 22(18):2283-90. PubMed ID: 16837529
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]