BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

161 related articles for article (PubMed ID: 21361324)

  • 1. Structural basis for the varying propensities of different amino acids to adopt the collagen conformation.
    Raman SS; Gopalakrishnan R; Wade RC; Subramanian V
    J Phys Chem B; 2011 Mar; 115(11):2593-607. PubMed ID: 21361324
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A host-guest set of triple-helical peptides: stability of Gly-X-Y triplets containing common nonpolar residues.
    Shah NK; Ramshaw JA; Kirkpatrick A; Shah C; Brodsky B
    Biochemistry; 1996 Aug; 35(32):10262-8. PubMed ID: 8756681
    [TBL] [Abstract][Full Text] [Related]  

  • 3. High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)4-Xaa-Yaa-Gly-(Pro-Pro-Gly)4]: implications for triple-helix hydration and Hyp(X) puckering.
    Okuyama K; Hongo C; Wu G; Mizuno K; Noguchi K; Ebisuzaki S; Tanaka Y; Nishino N; Bächinger HP
    Biopolymers; 2009 May; 91(5):361-72. PubMed ID: 19137577
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Electrostatic interactions involving lysine make major contributions to collagen triple-helix stability.
    Persikov AV; Ramshaw JA; Kirkpatrick A; Brodsky B
    Biochemistry; 2005 Feb; 44(5):1414-22. PubMed ID: 15683226
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Molecular dynamic simulation studies on the effect of one residue chain staggering on the structure and stability of heterotrimeric collagen-like peptides with interruption.
    Singam ER; Balamurugan K; Gopalakrishnan R; Subramanian SR; Subramanian V; Ramasami T
    Biopolymers; 2012 Nov; 97(11):847-63. PubMed ID: 22899360
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The folding mechanism of collagen-like model peptides explored through detailed molecular simulations.
    Stultz CM
    Protein Sci; 2006 Sep; 15(9):2166-77. PubMed ID: 16943446
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Molecular dynamics investigations on the effect of D amino acid substitution in a triple-helix structure and the stability of collagen.
    Punitha V; Raman SS; Parthasarathi R; Subramanian V; Rao JR; Nair BU; Ramasami T
    J Phys Chem B; 2009 Jul; 113(26):8983-92. PubMed ID: 19518060
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Amino acid propensities for the collagen triple-helix.
    Persikov AV; Ramshaw JA; Kirkpatrick A; Brodsky B
    Biochemistry; 2000 Dec; 39(48):14960-7. PubMed ID: 11101312
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The occurrence of C--H...O hydrogen bonds in alpha-helices and helix termini in globular proteins.
    Manikandan K; Ramakumar S
    Proteins; 2004 Sep; 56(4):768-81. PubMed ID: 15281129
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Unique side chain conformation of a Leu residue in a triple-helical structure.
    Okuyama K; Narita H; Kawaguchi T; Noguchi K; Tanaka Y; Nishino N
    Biopolymers; 2007 Jun; 86(3):212-21. PubMed ID: 17373653
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Collagen model peptides: Sequence dependence of triple-helix stability.
    Persikov AV; Ramshaw JA; Brodsky B
    Biopolymers; 2000; 55(6):436-50. PubMed ID: 11304671
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Staggered molecular packing in crystals of a collagen-like peptide with a single charged pair.
    Kramer RZ; Venugopal MG; Bella J; Mayville P; Brodsky B; Berman HM
    J Mol Biol; 2000 Sep; 301(5):1191-205. PubMed ID: 10966815
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Structural consequences of D-amino acids in collagen triple-helical peptides.
    Shah NK; Brodsky B; Kirkpatrick A; Ramshaw JA
    Biopolymers; 1999 Apr; 49(4):297-302. PubMed ID: 10079768
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Role of aspartic acid in collagen structure and stability: A molecular dynamics investigation.
    Raman SS; Parthasarathi R; Subramanian V; Ramasami T
    J Phys Chem B; 2006 Oct; 110(41):20678-85. PubMed ID: 17034259
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Bound water in the collagen-like triple-helical structure.
    Lazarev YA; Grishkovsky BA; Khromova TB; Lazareva AV; Grechishko VS
    Biopolymers; 1992 Feb; 32(2):189-95. PubMed ID: 1637993
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Conformational effects of Gly-X-Gly interruptions in the collagen triple helix.
    Bella J; Liu J; Kramer R; Brodsky B; Berman HM
    J Mol Biol; 2006 Sep; 362(2):298-311. PubMed ID: 16919298
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Severity of osteogenesis imperfecta and structure of a collagen-like peptide modeling a lethal mutation site.
    Radmer RJ; Klein TE
    Biochemistry; 2004 May; 43(18):5314-23. PubMed ID: 15122897
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Effect of hydration on the stability of the collagen-like triple-helical structure of [4(R)-hydroxyprolyl-4(R)-hydroxyprolylglycine]10.
    Kawahara K; Nishi Y; Nakamura S; Uchiyama S; Nishiuchi Y; Nakazawa T; Ohkubo T; Kobayashi Y
    Biochemistry; 2005 Dec; 44(48):15812-22. PubMed ID: 16313184
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Role of length-dependent stability of collagen-like peptides.
    Raman SS; Parthasarathi R; Subramanian V; Ramasami T
    J Phys Chem B; 2008 Feb; 112(5):1533-9. PubMed ID: 18186623
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Imino acids and collagen triple helix stability: characterization of collagen-like polypeptides containing Hyp-Hyp-Gly sequence repeats.
    Berisio R; Granata V; Vitagliano L; Zagari A
    J Am Chem Soc; 2004 Sep; 126(37):11402-3. PubMed ID: 15366862
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.