166 related articles for article (PubMed ID: 21382373)
1. The solution structure of coronaviral stem-loop 2 (SL2) reveals a canonical CUYG tetraloop fold.
Lee CW; Li L; Giedroc DP
FEBS Lett; 2011 Apr; 585(7):1049-53. PubMed ID: 21382373
[TBL] [Abstract][Full Text] [Related]
2. A U-turn motif-containing stem-loop in the coronavirus 5' untranslated region plays a functional role in replication.
Liu P; Li L; Millership JJ; Kang H; Leibowitz JL; Giedroc DP
RNA; 2007 May; 13(5):763-80. PubMed ID: 17353353
[TBL] [Abstract][Full Text] [Related]
3. Mouse hepatitis virus stem-loop 2 adopts a uYNMG(U)a-like tetraloop structure that is highly functionally tolerant of base substitutions.
Liu P; Li L; Keane SC; Yang D; Leibowitz JL; Giedroc DP
J Virol; 2009 Dec; 83(23):12084-93. PubMed ID: 19759148
[TBL] [Abstract][Full Text] [Related]
4. Promoter activity of SARS coronavirus 5' UTR sequence in eukaryotic cells.
Zhang JJ; Huang AL; Shi XL; Zhang XF
Sichuan Da Xue Xue Bao Yi Xue Ban; 2006 Jan; 37(1):5-9. PubMed ID: 16468630
[TBL] [Abstract][Full Text] [Related]
5. Putative cis-acting stem-loops in the 5' untranslated region of the severe acute respiratory syndrome coronavirus can substitute for their mouse hepatitis virus counterparts.
Kang H; Feng M; Schroeder ME; Giedroc DP; Leibowitz JL
J Virol; 2006 Nov; 80(21):10600-14. PubMed ID: 16920822
[TBL] [Abstract][Full Text] [Related]
6. Group-specific structural features of the 5'-proximal sequences of coronavirus genomic RNAs.
Chen SC; Olsthoorn RC
Virology; 2010 May; 401(1):29-41. PubMed ID: 20202661
[TBL] [Abstract][Full Text] [Related]
7. Stem-loop IV in the 5' untranslated region is a cis-acting element in bovine coronavirus defective interfering RNA replication.
Raman S; Brian DA
J Virol; 2005 Oct; 79(19):12434-46. PubMed ID: 16160171
[TBL] [Abstract][Full Text] [Related]
8. High frequency of transition to transversion ratio in the stem region of RNA secondary structure of untranslated region of SARS-CoV-2.
Dash M; Meher P; Aditya Kumar ; Satapathy SS; Namsa ND
PeerJ; 2024; 12():e16962. PubMed ID: 38666080
[TBL] [Abstract][Full Text] [Related]
9. Stem-loop 1 in the 5' UTR of the SARS coronavirus can substitute for its counterpart in mouse hepatitis virus.
Kang H; Feng M; Schroeder ME; Giedroc DP; Leibowitz JL
Adv Exp Med Biol; 2006; 581():105-8. PubMed ID: 17037514
[No Abstract] [Full Text] [Related]
10.
Vögele J; Ferner JP; Altincekic N; Bains JK; Ceylan B; Fürtig B; Grün JT; Hengesbach M; Hohmann KF; Hymon D; Knezic B; Löhr F; Peter SA; Pyper D; Qureshi NS; Richter C; Schlundt A; Schwalbe H; Stirnal E; Sudakov A; Wacker A; Weigand JE; Wirmer-Bartoschek J; Wöhnert J; Duchardt-Ferner E
Biomol NMR Assign; 2021 Oct; 15(2):335-340. PubMed ID: 33928512
[TBL] [Abstract][Full Text] [Related]
11. Structural lability in stem-loop 1 drives a 5' UTR-3' UTR interaction in coronavirus replication.
Li L; Kang H; Liu P; Makkinje N; Williamson ST; Leibowitz JL; Giedroc DP
J Mol Biol; 2008 Mar; 377(3):790-803. PubMed ID: 18289557
[TBL] [Abstract][Full Text] [Related]
12. A 5'-proximal stem-loop structure of 5' untranslated region of porcine reproductive and respiratory syndrome virus genome is key for virus replication.
Lu J; Gao F; Wei Z; Liu P; Liu C; Zheng H; Li Y; Lin T; Yuan S
Virol J; 2011 Apr; 8():172. PubMed ID: 21496223
[TBL] [Abstract][Full Text] [Related]
13. The complete genome sequence of severe acute respiratory syndrome coronavirus strain HKU-39849 (HK-39).
Zeng FY; Chan CW; Chan MN; Chen JD; Chow KY; Hon CC; Hui KH; Li J; Li VY; Wang CY; Wang PY; Guan Y; Zheng B; Poon LL; Chan KH; Yuen KY; Peiris JS; Leung FC
Exp Biol Med (Maywood); 2003 Jul; 228(7):866-73. PubMed ID: 12876307
[TBL] [Abstract][Full Text] [Related]
14. siRNA targeting the leader sequence of SARS-CoV inhibits virus replication.
Li T; Zhang Y; Fu L; Yu C; Li X; Li Y; Zhang X; Rong Z; Wang Y; Ning H; Liang R; Chen W; Babiuk LA; Chang Z
Gene Ther; 2005 May; 12(9):751-61. PubMed ID: 15772689
[TBL] [Abstract][Full Text] [Related]
15. Mutational analysis of a conserved tetraloop in the 5' untranslated region of hepatitis C virus identifies a novel RNA element essential for the internal ribosome entry site function.
Psaridi L; Georgopoulou U; Varaklioti A; Mavromara P
FEBS Lett; 1999 Jun; 453(1-2):49-53. PubMed ID: 10403373
[TBL] [Abstract][Full Text] [Related]
16. Taxonomy of genus Hepacivirus. Application of palindromic nucleotide substitutions for the determination of genotypes of human hepatitis C virus species.
Giangaspero M; Harasawa R; Zanetti A
J Virol Methods; 2008 Nov; 153(2):280-99. PubMed ID: 18657575
[TBL] [Abstract][Full Text] [Related]
17. A conserved RNA pseudoknot in a putative molecular switch domain of the 3'-untranslated region of coronaviruses is only marginally stable.
Stammler SN; Cao S; Chen SJ; Giedroc DP
RNA; 2011 Sep; 17(9):1747-59. PubMed ID: 21799029
[TBL] [Abstract][Full Text] [Related]
18. miR-122, small RNA annealing and sequence mutations alter the predicted structure of the Hepatitis C virus 5' UTR RNA to stabilize and promote viral RNA accumulation.
Amador-Cañizares Y; Panigrahi M; Huys A; Kunden RD; Adams HM; Schinold MJ; Wilson JA
Nucleic Acids Res; 2018 Oct; 46(18):9776-9792. PubMed ID: 30053137
[TBL] [Abstract][Full Text] [Related]
19. Using All-Atom Potentials to Refine RNA Structure Predictions of SARS-CoV-2 Stem Loops.
Bergonzo C; Szakal AL
Int J Mol Sci; 2020 Aug; 21(17):. PubMed ID: 32867123
[TBL] [Abstract][Full Text] [Related]
20. RNA dimerization plays a role in ribosomal frameshifting of the SARS coronavirus.
Ishimaru D; Plant EP; Sims AC; Yount BL; Roth BM; Eldho NV; Pérez-Alvarado GC; Armbruster DW; Baric RS; Dinman JD; Taylor DR; Hennig M
Nucleic Acids Res; 2013 Feb; 41(4):2594-608. PubMed ID: 23275571
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
