These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
308 related articles for article (PubMed ID: 21405197)
21. Identification of regulatory network topological units coordinating the genome-wide transcriptional response to glucose in Escherichia coli. Gutierrez-Ríos RM; Freyre-Gonzalez JA; Resendis O; Collado-Vides J; Saier M; Gosset G BMC Microbiol; 2007 Jun; 7():53. PubMed ID: 17559662 [TBL] [Abstract][Full Text] [Related]
22. Modeling of gene regulatory network dynamics using threshold logic. Gowda T; Vrudhula S; Kim S Ann N Y Acad Sci; 2009 Mar; 1158():71-81. PubMed ID: 19348633 [TBL] [Abstract][Full Text] [Related]
23. The condition-dependent transcriptional network in Escherichia coli. Lemmens K; De Bie T; Dhollander T; Monsieurs P; De Moor B; Collado-Vides J; Engelen K; Marchal K Ann N Y Acad Sci; 2009 Mar; 1158():29-35. PubMed ID: 19348629 [TBL] [Abstract][Full Text] [Related]
24. Boolean dynamics of genetic regulatory networks inferred from microarray time series data. Martin S; Zhang Z; Martino A; Faulon JL Bioinformatics; 2007 Apr; 23(7):866-74. PubMed ID: 17267426 [TBL] [Abstract][Full Text] [Related]
25. Transcriptional regulatory networks in Saccharomyces cerevisiae. Lee TI; Rinaldi NJ; Robert F; Odom DT; Bar-Joseph Z; Gerber GK; Hannett NM; Harbison CT; Thompson CM; Simon I; Zeitlinger J; Jennings EG; Murray HL; Gordon DB; Ren B; Wyrick JJ; Tagne JB; Volkert TL; Fraenkel E; Gifford DK; Young RA Science; 2002 Oct; 298(5594):799-804. PubMed ID: 12399584 [TBL] [Abstract][Full Text] [Related]
26. A Gibbs sampler for the identification of gene expression and network connectivity consistency. Brynildsen MP; Tran LM; Liao JC Bioinformatics; 2006 Dec; 22(24):3040-6. PubMed ID: 17060361 [TBL] [Abstract][Full Text] [Related]
27. List-decoding methods for inferring polynomials in finite dynamical gene network models. Dingel J; Milenkovic O Bioinformatics; 2009 Jul; 25(13):1686-93. PubMed ID: 19401400 [TBL] [Abstract][Full Text] [Related]
28. Time-varying modeling of gene expression regulatory networks using the wavelet dynamic vector autoregressive method. Fujita A; Sato JR; Garay-Malpartida HM; Morettin PA; Sogayar MC; Ferreira CE Bioinformatics; 2007 Jul; 23(13):1623-30. PubMed ID: 17463021 [TBL] [Abstract][Full Text] [Related]
29. Inferring gene regulatory networks from multiple microarray datasets. Wang Y; Joshi T; Zhang XS; Xu D; Chen L Bioinformatics; 2006 Oct; 22(19):2413-20. PubMed ID: 16864593 [TBL] [Abstract][Full Text] [Related]
30. A non-homogeneous dynamic Bayesian network with sequentially coupled interaction parameters for applications in systems and synthetic biology. Grzegorczyk M; Husmeier D Stat Appl Genet Mol Biol; 2012 Jul; 11(4):. PubMed ID: 22850067 [TBL] [Abstract][Full Text] [Related]
31. Transcriptional network inference from functional similarity and expression data: a global supervised approach. Ambroise J; Robert A; Macq B; Gala JL Stat Appl Genet Mol Biol; 2012 Jan; 11(1):Article 2. PubMed ID: 22499684 [TBL] [Abstract][Full Text] [Related]
32. Inference of regulatory gene interactions from expression data using three-way mutual information. Watkinson J; Liang KC; Wang X; Zheng T; Anastassiou D Ann N Y Acad Sci; 2009 Mar; 1158():302-13. PubMed ID: 19348651 [TBL] [Abstract][Full Text] [Related]
33. Weighted-LASSO for structured network inference from time course data. Charbonnier C; Chiquet J; Ambroise C Stat Appl Genet Mol Biol; 2010; 9():Article 15. PubMed ID: 20196750 [TBL] [Abstract][Full Text] [Related]
34. Modeling gene regulation networks using ordinary differential equations. Cao J; Qi X; Zhao H Methods Mol Biol; 2012; 802():185-97. PubMed ID: 22130881 [TBL] [Abstract][Full Text] [Related]
35. Qualitative modelling and formal verification of the FLR1 gene mancozeb response in Saccharomyces cerevisiae. Monteiro PT; Dias PJ; Ropers D; Oliveira AL; Sá-Correia I; Teixeira MC; Freitas AT IET Syst Biol; 2011 Sep; 5(5):308-16. PubMed ID: 22010757 [TBL] [Abstract][Full Text] [Related]
36. A bi-dimensional regression tree approach to the modeling of gene expression regulation. Ruan J; Zhang W Bioinformatics; 2006 Feb; 22(3):332-40. PubMed ID: 16303796 [TBL] [Abstract][Full Text] [Related]
37. Identification of functional modules using network topology and high-throughput data. Ulitsky I; Shamir R BMC Syst Biol; 2007 Jan; 1():8. PubMed ID: 17408515 [TBL] [Abstract][Full Text] [Related]
38. Genetic network analyzer: a tool for the qualitative modeling and simulation of bacterial regulatory networks. Batt G; Besson B; Ciron PE; de Jong H; Dumas E; Geiselmann J; Monte R; Monteiro PT; Page M; Rechenmann F; Ropers D Methods Mol Biol; 2012; 804():439-62. PubMed ID: 22144166 [TBL] [Abstract][Full Text] [Related]
39. Reconstructing directed signed gene regulatory network from microarray data. Qiu P; Plevritis SK IEEE Trans Biomed Eng; 2011 Dec; 58(12):3518-21. PubMed ID: 21803675 [TBL] [Abstract][Full Text] [Related]
40. Empirically determining the sample size for large-scale gene network inference algorithms. Altay G IET Syst Biol; 2012 Apr; 6(2):35-43. PubMed ID: 22519356 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]