101 related articles for article (PubMed ID: 21424008)
1. Primer extension reactions as a tool to uncover folding motifs within complex G-rich sequences: analysis of the human KRAS NHE.
Paramasivam M; Cogoi S; Xodo LE
Chem Commun (Camb); 2011 May; 47(17):4965-7. PubMed ID: 21424008
[TBL] [Abstract][Full Text] [Related]
2. Protein hnRNPA1 binds to a critical G-rich element of KRAS and unwinds G-quadruplex structures: implications in transcription.
Xodo L; Paramasivam M; Membrino A; Cogoi S
Nucleic Acids Symp Ser (Oxf); 2008; (52):159-60. PubMed ID: 18776302
[TBL] [Abstract][Full Text] [Related]
3. Protein hnRNP A1 and its derivative Up1 unfold quadruplex DNA in the human KRAS promoter: implications for transcription.
Paramasivam M; Membrino A; Cogoi S; Fukuda H; Nakagama H; Xodo LE
Nucleic Acids Res; 2009 May; 37(9):2841-53. PubMed ID: 19282454
[TBL] [Abstract][Full Text] [Related]
4. High-resolution three-dimensional NMR structure of the
Kerkour A; Marquevielle J; Ivashchenko S; Yatsunyk LA; Mergny JL; Salgado GF
J Biol Chem; 2017 May; 292(19):8082-8091. PubMed ID: 28330874
[TBL] [Abstract][Full Text] [Related]
5. Interaction of hnRNP A1 with telomere DNA G-quadruplex structures studied at the single molecule level.
Krüger AC; Raarup MK; Nielsen MM; Kristensen M; Besenbacher F; Kjems J; Birkedal V
Eur Biophys J; 2010 Aug; 39(9):1343-50. PubMed ID: 20213319
[TBL] [Abstract][Full Text] [Related]
6. The KRAS promoter responds to Myc-associated zinc finger and poly(ADP-ribose) polymerase 1 proteins, which recognize a critical quadruplex-forming GA-element.
Cogoi S; Paramasivam M; Membrino A; Yokoyama KK; Xodo LE
J Biol Chem; 2010 Jul; 285(29):22003-16. PubMed ID: 20457603
[TBL] [Abstract][Full Text] [Related]
7. Critical role of hnRNP A1 in activating KRAS transcription in pancreatic cancer cells: A molecular mechanism involving G4 DNA.
Cogoi S; Rapozzi V; Cauci S; Xodo LE
Biochim Biophys Acta Gen Subj; 2017 May; 1861(5 Pt B):1389-1398. PubMed ID: 27888145
[TBL] [Abstract][Full Text] [Related]
8. Structural polymorphism within a regulatory element of the human KRAS promoter: formation of G4-DNA recognized by nuclear proteins.
Cogoi S; Paramasivam M; Spolaore B; Xodo LE
Nucleic Acids Res; 2008 Jun; 36(11):3765-80. PubMed ID: 18490377
[TBL] [Abstract][Full Text] [Related]
9. Structure-based incorporation of 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine into the human telomeric repeat DNA as a probe for UP1 binding and destabilization of G-tetrad structures.
Myers JC; Moore SA; Shamoo Y
J Biol Chem; 2003 Oct; 278(43):42300-6. PubMed ID: 12904298
[TBL] [Abstract][Full Text] [Related]
10. Identification of a new G-quadruplex motif in the KRAS promoter and design of pyrene-modified G4-decoys with antiproliferative activity in pancreatic cancer cells.
Cogoi S; Paramasivam M; Filichev V; Géci I; Pedersen EB; Xodo LE
J Med Chem; 2009 Jan; 52(2):564-8. PubMed ID: 19099510
[TBL] [Abstract][Full Text] [Related]
11. The regulatory G4 motif of the Kirsten ras (KRAS) gene is sensitive to guanine oxidation: implications on transcription.
Cogoi S; Ferino A; Miglietta G; Pedersen EB; Xodo LE
Nucleic Acids Res; 2018 Jan; 46(2):661-676. PubMed ID: 29165690
[TBL] [Abstract][Full Text] [Related]
12. G-quadruplex formation within the promoter of the KRAS proto-oncogene and its effect on transcription.
Cogoi S; Xodo LE
Nucleic Acids Res; 2006; 34(9):2536-49. PubMed ID: 16687659
[TBL] [Abstract][Full Text] [Related]
13. KRAS promoter oligonucleotide with decoy activity dimerizes into a unique topology consisting of two G-quadruplex units.
Podbevšek P; Plavec J
Nucleic Acids Res; 2016 Jan; 44(2):917-25. PubMed ID: 26656490
[TBL] [Abstract][Full Text] [Related]
14. Characterization of the G-quadruplexes in the duplex nuclease hypersensitive element of the PDGF-A promoter and modulation of PDGF-A promoter activity by TMPyP4.
Qin Y; Rezler EM; Gokhale V; Sun D; Hurley LH
Nucleic Acids Res; 2007; 35(22):7698-713. PubMed ID: 17984069
[TBL] [Abstract][Full Text] [Related]
15. Insight into the Complexity of the i-Motif and G-Quadruplex DNA Structures Formed in the KRAS Promoter and Subsequent Drug-Induced Gene Repression.
Kaiser CE; Van Ert NA; Agrawal P; Chawla R; Yang D; Hurley LH
J Am Chem Soc; 2017 Jun; 139(25):8522-8536. PubMed ID: 28570076
[TBL] [Abstract][Full Text] [Related]
16. The 3'-end region of the human PDGFR-β core promoter nuclease hypersensitive element forms a mixture of two unique end-insertion G-quadruplexes.
Onel B; Carver M; Agrawal P; Hurley LH; Yang D
Biochim Biophys Acta Gen Subj; 2018 Apr; 1862(4):846-854. PubMed ID: 29288770
[TBL] [Abstract][Full Text] [Related]
17. The Consequences of Overlapping G-Quadruplexes and i-Motifs in the Platelet-Derived Growth Factor Receptor β Core Promoter Nuclease Hypersensitive Element Can Explain the Unexpected Effects of Mutations and Provide Opportunities for Selective Targeting of Both Structures by Small Molecules To Downregulate Gene Expression.
Brown RV; Wang T; Chappeta VR; Wu G; Onel B; Chawla R; Quijada H; Camp SM; Chiang ET; Lassiter QR; Lee C; Phanse S; Turnidge MA; Zhao P; Garcia JGN; Gokhale V; Yang D; Hurley LH
J Am Chem Soc; 2017 Jun; 139(22):7456-7475. PubMed ID: 28471683
[TBL] [Abstract][Full Text] [Related]
18.
Marquevielle J; Kumar MVV; Mergny JL; Salgado GF
Biomol NMR Assign; 2018 Apr; 12(1):123-127. PubMed ID: 29189986
[TBL] [Abstract][Full Text] [Related]
19. RGG-box in hnRNPA1 specifically recognizes the telomere G-quadruplex DNA and enhances the G-quadruplex unfolding ability of UP1 domain.
Ghosh M; Singh M
Nucleic Acids Res; 2018 Nov; 46(19):10246-10261. PubMed ID: 30247678
[TBL] [Abstract][Full Text] [Related]
20. Facilitation of a structural transition in the polypurine/polypyrimidine tract within the proximal promoter region of the human VEGF gene by the presence of potassium and G-quadruplex-interactive agents.
Sun D; Guo K; Rusche JJ; Hurley LH
Nucleic Acids Res; 2005; 33(18):6070-80. PubMed ID: 16239639
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]