These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
3. ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes. Kristiansson E; Hugenholtz P; Dalevi D Bioinformatics; 2009 Oct; 25(20):2737-8. PubMed ID: 19696045 [TBL] [Abstract][Full Text] [Related]
4. [Metagenomics as a Tool for the Investigation of Uncultured Microorganisms]. Ravin NV; Mardanova AV; Skryabin KG Genetika; 2015 May; 51(5):519-28. PubMed ID: 26137633 [TBL] [Abstract][Full Text] [Related]
5. Molecular methods to study complex microbial communities. Vieites JM; Guazzaroni ME; Beloqui A; Golyshin PN; Ferrer M Methods Mol Biol; 2010; 668():1-37. PubMed ID: 20830553 [TBL] [Abstract][Full Text] [Related]
6. Viral metagenomic analysis of chickens with runting-stunting syndrome in the Republic of Korea. Kim HR; Kwon YK; Jang I; Bae YC Virol J; 2020 Apr; 17(1):53. PubMed ID: 32293477 [TBL] [Abstract][Full Text] [Related]
7. From bacterial to microbial ecosystems (metagenomics). Williamson SJ; Yooseph S Methods Mol Biol; 2012; 804():35-55. PubMed ID: 22144147 [TBL] [Abstract][Full Text] [Related]
9. Targeted metagenomics: a high-resolution metagenomics approach for specific gene clusters in complex microbial communities. Suenaga H Environ Microbiol; 2012 Jan; 14(1):13-22. PubMed ID: 21366818 [TBL] [Abstract][Full Text] [Related]
10. Construction of small-insert and large-insert metagenomic libraries. Simon C; Daniel R Methods Mol Biol; 2010; 668():39-50. PubMed ID: 20830554 [TBL] [Abstract][Full Text] [Related]
11. Metagenomic signatures of 86 microbial and viral metagenomes. Willner D; Thurber RV; Rohwer F Environ Microbiol; 2009 Jul; 11(7):1752-66. PubMed ID: 19302541 [TBL] [Abstract][Full Text] [Related]
12. Profiling microbial strains in urban environments using metagenomic sequencing data. Zolfo M; Asnicar F; Manghi P; Pasolli E; Tett A; Segata N Biol Direct; 2018 May; 13(1):9. PubMed ID: 29743119 [TBL] [Abstract][Full Text] [Related]
13. Statistical evaluation of methods for identification of differentially abundant genes in comparative metagenomics. Jonsson V; Österlund T; Nerman O; Kristiansson E BMC Genomics; 2016 Jan; 17():78. PubMed ID: 26810311 [TBL] [Abstract][Full Text] [Related]
14. Gastrointestinal microbiology enters the metagenomics era. Frank DN; Pace NR Curr Opin Gastroenterol; 2008 Jan; 24(1):4-10. PubMed ID: 18043225 [TBL] [Abstract][Full Text] [Related]
15. Beyond the bounds of orthology: functional inference from metagenomic context. Vey G; Moreno-Hagelsieb G Mol Biosyst; 2010 Jul; 6(7):1247-54. PubMed ID: 20419183 [TBL] [Abstract][Full Text] [Related]