These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

148 related articles for article (PubMed ID: 21450710)

  • 21. An integrated software system for analyzing ChIP-chip and ChIP-seq data.
    Ji H; Jiang H; Ma W; Johnson DS; Myers RM; Wong WH
    Nat Biotechnol; 2008 Nov; 26(11):1293-300. PubMed ID: 18978777
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data.
    Zacher B; Kuan PF; Tresch A
    BMC Bioinformatics; 2010 Apr; 11():194. PubMed ID: 20398407
    [TBL] [Abstract][Full Text] [Related]  

  • 23. CARPET: a web-based package for the analysis of ChIP-chip and expression tiling data.
    Cesaroni M; Cittaro D; Brozzi A; Pelicci PG; Luzi L
    Bioinformatics; 2008 Dec; 24(24):2918-20. PubMed ID: 18945685
    [TBL] [Abstract][Full Text] [Related]  

  • 24. W-ChIPeaks: a comprehensive web application tool for processing ChIP-chip and ChIP-seq data.
    Lan X; Bonneville R; Apostolos J; Wu W; Jin VX
    Bioinformatics; 2011 Feb; 27(3):428-30. PubMed ID: 21138948
    [TBL] [Abstract][Full Text] [Related]  

  • 25. MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data.
    Chen Y; Meyer CA; Liu T; Li W; Liu JS; Liu XS
    Genome Biol; 2011; 12(2):R11. PubMed ID: 21284836
    [TBL] [Abstract][Full Text] [Related]  

  • 26. JAMIE: joint analysis of multiple ChIP-chip experiments.
    Wu H; Ji H
    Bioinformatics; 2010 Aug; 26(15):1864-70. PubMed ID: 20551135
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Cistrome: an integrative platform for transcriptional regulation studies.
    Liu T; Ortiz JA; Taing L; Meyer CA; Lee B; Zhang Y; Shin H; Wong SS; Ma J; Lei Y; Pape UJ; Poidinger M; Chen Y; Yeung K; Brown M; Turpaz Y; Liu XS
    Genome Biol; 2011 Aug; 12(8):R83. PubMed ID: 21859476
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Metaanalysis of ChIP-chip data.
    Engelhorn J; Turck F
    Methods Mol Biol; 2010; 631():185-207. PubMed ID: 20204876
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Analysis of Protein-DNA Interaction by Chromatin Immunoprecipitation and DNA Tiling Microarray (ChIP-on-chip).
    Gao H; Zhao C
    Methods Mol Biol; 2018; 1689():43-51. PubMed ID: 29027163
    [TBL] [Abstract][Full Text] [Related]  

  • 30. ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data.
    Zhu LJ; Gazin C; Lawson ND; Pagès H; Lin SM; Lapointe DS; Green MR
    BMC Bioinformatics; 2010 May; 11():237. PubMed ID: 20459804
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Comparing genome-wide chromatin profiles using ChIP-chip or ChIP-seq.
    Johannes F; Wardenaar R; Colomé-Tatché M; Mousson F; de Graaf P; Mokry M; Guryev V; Timmers HT; Cuppen E; Jansen RC
    Bioinformatics; 2010 Apr; 26(8):1000-6. PubMed ID: 20208068
    [TBL] [Abstract][Full Text] [Related]  

  • 32. SignalSpider: probabilistic pattern discovery on multiple normalized ChIP-Seq signal profiles.
    Wong KC; Li Y; Peng C; Zhang Z
    Bioinformatics; 2015 Jan; 31(1):17-24. PubMed ID: 25192742
    [TBL] [Abstract][Full Text] [Related]  

  • 33. CAGER: classification analysis of gene expression regulation using multiple information sources.
    Ruan J; Zhang W
    BMC Bioinformatics; 2005 May; 6():114. PubMed ID: 15890068
    [TBL] [Abstract][Full Text] [Related]  

  • 34. A web based resource characterizing the zebrafish developmental profile of over 16,000 transcripts.
    Ouyang M; Garnett AT; Han TM; Hama K; Lee A; Deng Y; Lee N; Liu HY; Amacher SL; Farber SA; Ho SY
    Gene Expr Patterns; 2008 Feb; 8(3):171-80. PubMed ID: 18068546
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Epigenetic analysis: ChIP-chip and ChIP-seq.
    Pellegrini M; Ferrari R
    Methods Mol Biol; 2012; 802():377-87. PubMed ID: 22130894
    [TBL] [Abstract][Full Text] [Related]  

  • 36. CMGRN: a web server for constructing multilevel gene regulatory networks using ChIP-seq and gene expression data.
    Guan D; Shao J; Deng Y; Wang P; Zhao Z; Liang Y; Wang J; Yan B
    Bioinformatics; 2014 Apr; 30(8):1190-1192. PubMed ID: 24389658
    [TBL] [Abstract][Full Text] [Related]  

  • 37. CHROMATRA: a Galaxy tool for visualizing genome-wide chromatin signatures.
    Hentrich T; Schulze JM; Emberly E; Kobor MS
    Bioinformatics; 2012 Mar; 28(5):717-8. PubMed ID: 22238257
    [TBL] [Abstract][Full Text] [Related]  

  • 38. PeakAnalyzer: genome-wide annotation of chromatin binding and modification loci.
    Salmon-Divon M; Dvinge H; Tammoja K; Bertone P
    BMC Bioinformatics; 2010 Aug; 11():415. PubMed ID: 20691053
    [TBL] [Abstract][Full Text] [Related]  

  • 39. MEME-ChIP: motif analysis of large DNA datasets.
    Machanick P; Bailey TL
    Bioinformatics; 2011 Jun; 27(12):1696-7. PubMed ID: 21486936
    [TBL] [Abstract][Full Text] [Related]  

  • 40.
    Zeng J; Li G
    Int J Biol Sci; 2018; 14(12):1724-1731. PubMed ID: 30416387
    [No Abstract]   [Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.