These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

201 related articles for article (PubMed ID: 21472565)

  • 1. Topoisomer differentiation of molecular knots by FTICR MS: lessons from class II lasso peptides.
    Zirah S; Afonso C; Linne U; Knappe TA; Marahiel MA; Rebuffat S; Tabet JC
    J Am Soc Mass Spectrom; 2011 Mar; 22(3):467-79. PubMed ID: 21472565
    [TBL] [Abstract][Full Text] [Related]  

  • 2. IRMPD Spectroscopy: Evidence of Hydrogen Bonding in the Gas Phase Conformations of Lasso Peptides and their Branched-Cyclic Topoisomers.
    Jeanne Dit Fouque K; Lavanant H; Zirah S; Steinmetz V; Rebuffat S; Maître P; Afonso C
    J Phys Chem A; 2016 Jun; 120(21):3810-6. PubMed ID: 27171649
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Determination of peptide topology through time-resolved double-resonance under electron capture dissociation conditions.
    Pérot-Taillandier M; Zirah S; Rebuffat S; Linne U; Marahiel MA; Cole RB; Tabet JC; Afonso C
    Anal Chem; 2012 Jun; 84(11):4957-64. PubMed ID: 22571326
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Structural signatures of the class III lasso peptide BI-32169 and the branched-cyclic topoisomers using trapped ion mobility spectrometry-mass spectrometry and tandem mass spectrometry.
    Jeanne Dit Fouque K; Bisram V; Hegemann JD; Zirah S; Rebuffat S; Fernandez-Lima F
    Anal Bioanal Chem; 2019 Sep; 411(24):6287-6296. PubMed ID: 30707269
    [TBL] [Abstract][Full Text] [Related]  

  • 5. General rules of fragmentation evidencing lasso structures in CID and ETD.
    Jeanne Dit Fouque K; Lavanant H; Zirah S; Hegemann JD; Fage CD; Marahiel MA; Rebuffat S; Afonso C
    Analyst; 2018 Feb; 143(5):1157-1170. PubMed ID: 29404537
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Signatures of Mechanically Interlocked Topology of Lasso Peptides by Ion Mobility-Mass Spectrometry: Lessons from a Collection of Representatives.
    Fouque KJD; Lavanant H; Zirah S; Hegemann JD; Zimmermann M; Marahiel MA; Rebuffat S; Afonso C
    J Am Soc Mass Spectrom; 2017 Feb; 28(2):315-322. PubMed ID: 27812920
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Metal ions induced secondary structure rearrangements: mechanically interlocked lasso vs. unthreaded branched-cyclic topoisomers.
    Jeanne Dit Fouque K; Moreno J; Hegemann JD; Zirah S; Rebuffat S; Fernandez-Lima F
    Analyst; 2018 May; 143(10):2323-2333. PubMed ID: 29721555
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The antibacterial threaded-lasso peptide capistruin inhibits bacterial RNA polymerase.
    Kuznedelov K; Semenova E; Knappe TA; Mukhamedyarov D; Srivastava A; Chatterjee S; Ebright RH; Marahiel MA; Severinov K
    J Mol Biol; 2011 Oct; 412(5):842-8. PubMed ID: 21396375
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Synthetic peptides derived from the sequence of a lasso peptide microcin J25 show antibacterial activity.
    Soudy R; Wang L; Kaur K
    Bioorg Med Chem; 2012 Mar; 20(5):1794-800. PubMed ID: 22304849
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Structural Insights from Tandem Mass Spectrometry, Ion Mobility-Mass Spectrometry, and Infrared/Ultraviolet Spectroscopy on Sphingonodin I: Lasso vs Branched-Cyclic Topoisomers.
    Dit Fouque KJ; Scutelnic V; Hegemann JD; Rebuffat S; Maître P; Rizzo TR; Fernandez-Lima F
    J Am Soc Mass Spectrom; 2021 Apr; 32(4):1096-1104. PubMed ID: 33765377
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Isolation and structural characterization of capistruin, a lasso peptide predicted from the genome sequence of Burkholderia thailandensis E264.
    Knappe TA; Linne U; Zirah S; Rebuffat S; Xie X; Marahiel MA
    J Am Chem Soc; 2008 Aug; 130(34):11446-54. PubMed ID: 18671394
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Combined infrared multiphoton dissociation and electron capture dissociation with a hollow electron beam in Fourier transform ion cyclotron resonance mass spectrometry.
    Tsybin YO; Witt M; Baykut G; Kjeldsen F; Håkansson P
    Rapid Commun Mass Spectrom; 2003; 17(15):1759-68. PubMed ID: 12872281
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Structural mechanism of transcription inhibition by lasso peptides microcin J25 and capistruin.
    Braffman NR; Piscotta FJ; Hauver J; Campbell EA; Link AJ; Darst SA
    Proc Natl Acad Sci U S A; 2019 Jan; 116(4):1273-1278. PubMed ID: 30626643
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Dissecting the maturation steps of the lasso peptide microcin J25 in vitro.
    Yan KP; Li Y; Zirah S; Goulard C; Knappe TA; Marahiel MA; Rebuffat S
    Chembiochem; 2012 May; 13(7):1046-52. PubMed ID: 22488892
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Combined electron capture and infrared multiphoton dissociation for multistage MS/MS in a Fourier transform ion cyclotron resonance mass spectrometer.
    Håkansson K; Chalmers MJ; Quinn JP; McFarland MA; Hendrickson CL; Marshall AG
    Anal Chem; 2003 Jul; 75(13):3256-62. PubMed ID: 12964777
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Sequence diversity in the lasso peptide framework: discovery of functional microcin J25 variants with multiple amino acid substitutions.
    Pan SJ; Link AJ
    J Am Chem Soc; 2011 Apr; 133(13):5016-23. PubMed ID: 21391585
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Protein kinase A phosphorylation characterized by tandem Fourier transform ion cyclotron resonance mass spectrometry.
    Chalmers MJ; Håkansson K; Johnson R; Smith R; Shen J; Emmett MR; Marshall AG
    Proteomics; 2004 Apr; 4(4):970-81. PubMed ID: 15048979
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Microcin J25, from the macrocyclic to the lasso structure: implications for biosynthetic, evolutionary and biotechnological perspectives.
    Rebuffat S; Blond A; Destoumieux-Garzón D; Goulard C; Peduzzi J
    Curr Protein Pept Sci; 2004 Oct; 5(5):383-91. PubMed ID: 15544533
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An experimental and computational investigation of spontaneous lasso formation in microcin J25.
    Ferguson AL; Zhang S; Dikiy I; Panagiotopoulos AZ; Debenedetti PG; James Link A
    Biophys J; 2010 Nov; 99(9):3056-65. PubMed ID: 21044604
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Fragmentation of singly, doubly, and triply charged hydrogen deficient peptide radical cations in infrared multiphoton dissociation and electron induced dissociation.
    Kalli A; Hess S
    J Am Soc Mass Spectrom; 2012 Feb; 23(2):244-63. PubMed ID: 22101468
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.