168 related articles for article (PubMed ID: 21493661)
1. Rapid membrane protein topology prediction.
Hennerdal A; Elofsson A
Bioinformatics; 2011 May; 27(9):1322-3. PubMed ID: 21493661
[TBL] [Abstract][Full Text] [Related]
2. The TOPCONS web server for consensus prediction of membrane protein topology and signal peptides.
Tsirigos KD; Peters C; Shu N; Käll L; Elofsson A
Nucleic Acids Res; 2015 Jul; 43(W1):W401-7. PubMed ID: 25969446
[TBL] [Abstract][Full Text] [Related]
3. TOPCONS: consensus prediction of membrane protein topology.
Bernsel A; Viklund H; Hennerdal A; Elofsson A
Nucleic Acids Res; 2009 Jul; 37(Web Server issue):W465-8. PubMed ID: 19429891
[TBL] [Abstract][Full Text] [Related]
4. Evaluation of methods for predicting the topology of beta-barrel outer membrane proteins and a consensus prediction method.
Bagos PG; Liakopoulos TD; Hamodrakas SJ
BMC Bioinformatics; 2005 Jan; 6():7. PubMed ID: 15647112
[TBL] [Abstract][Full Text] [Related]
5. PROMALS web server for accurate multiple protein sequence alignments.
Pei J; Kim BH; Tang M; Grishin NV
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W649-52. PubMed ID: 17452345
[TBL] [Abstract][Full Text] [Related]
6. BPROMPT: A consensus server for membrane protein prediction.
Taylor PD; Attwood TK; Flower DR
Nucleic Acids Res; 2003 Jul; 31(13):3698-700. PubMed ID: 12824397
[TBL] [Abstract][Full Text] [Related]
7. PSI/TM-Coffee: a web server for fast and accurate multiple sequence alignments of regular and transmembrane proteins using homology extension on reduced databases.
Floden EW; Tommaso PD; Chatzou M; Magis C; Notredame C; Chang JM
Nucleic Acids Res; 2016 Jul; 44(W1):W339-43. PubMed ID: 27106060
[TBL] [Abstract][Full Text] [Related]
8. CCTOP: a Consensus Constrained TOPology prediction web server.
Dobson L; Reményi I; Tusnády GE
Nucleic Acids Res; 2015 Jul; 43(W1):W408-12. PubMed ID: 25943549
[TBL] [Abstract][Full Text] [Related]
9. waveTM: wavelet-based transmembrane segment prediction.
Pashou EE; Litou ZI; Liakopoulos TD; Hamodrakas SJ
In Silico Biol; 2004; 4(2):127-31. PubMed ID: 15107018
[TBL] [Abstract][Full Text] [Related]
10. Porter: a new, accurate server for protein secondary structure prediction.
Pollastri G; McLysaght A
Bioinformatics; 2005 Apr; 21(8):1719-20. PubMed ID: 15585524
[TBL] [Abstract][Full Text] [Related]
11. TRAMPLE: the transmembrane protein labelling environment.
Fariselli P; Finelli M; Rossi I; Amico M; Zauli A; Martelli PL; Casadio R
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W198-201. PubMed ID: 15980454
[TBL] [Abstract][Full Text] [Related]
12. The HMMTOP transmembrane topology prediction server.
Tusnády GE; Simon I
Bioinformatics; 2001 Sep; 17(9):849-50. PubMed ID: 11590105
[TBL] [Abstract][Full Text] [Related]
13. Web-based toolkits for topology prediction of transmembrane helical proteins, fold recognition, structure and binding scoring, folding-kinetics analysis and comparative analysis of domain combinations.
Zhou H; Zhang C; Liu S; Zhou Y
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W193-7. PubMed ID: 15980453
[TBL] [Abstract][Full Text] [Related]
14. JPred: a consensus secondary structure prediction server.
Cuff JA; Clamp ME; Siddiqui AS; Finlay M; Barton GJ
Bioinformatics; 1998; 14(10):892-3. PubMed ID: 9927721
[TBL] [Abstract][Full Text] [Related]
15. Enhanced recognition of protein transmembrane domains with prediction-based structural profiles.
Cao B; Porollo A; Adamczak R; Jarrell M; Meller J
Bioinformatics; 2006 Feb; 22(3):303-9. PubMed ID: 16293670
[TBL] [Abstract][Full Text] [Related]
16. The HHpred interactive server for protein homology detection and structure prediction.
Söding J; Biegert A; Lupas AN
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W244-8. PubMed ID: 15980461
[TBL] [Abstract][Full Text] [Related]
17. A guideline to proteome-wide α-helical membrane protein topology predictions.
Tsirigos KD; Hennerdal A; Käll L; Elofsson A
Proteomics; 2012 Aug; 12(14):2282-94. PubMed ID: 22685073
[TBL] [Abstract][Full Text] [Related]
18. ZPRED: predicting the distance to the membrane center for residues in alpha-helical membrane proteins.
Granseth E; Viklund H; Elofsson A
Bioinformatics; 2006 Jul; 22(14):e191-6. PubMed ID: 16873471
[TBL] [Abstract][Full Text] [Related]
19. PROMALS3D web server for accurate multiple protein sequence and structure alignments.
Pei J; Tang M; Grishin NV
Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W30-4. PubMed ID: 18503087
[TBL] [Abstract][Full Text] [Related]
20. SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology.
Viklund H; Bernsel A; Skwark M; Elofsson A
Bioinformatics; 2008 Dec; 24(24):2928-9. PubMed ID: 18945683
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]