These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
442 related articles for article (PubMed ID: 21498402)
1. MAISTAS: a tool for automatic structural evaluation of alternative splicing products. Floris M; Raimondo D; Leoni G; Orsini M; Marcatili P; Tramontano A Bioinformatics; 2011 Jun; 27(12):1625-9. PubMed ID: 21498402 [TBL] [Abstract][Full Text] [Related]
2. Coding potential of the products of alternative splicing in human. Leoni G; Le Pera L; Ferrè F; Raimondo D; Tramontano A Genome Biol; 2011; 12(1):R9. PubMed ID: 21251333 [TBL] [Abstract][Full Text] [Related]
3. Splice-mediated Variants of Proteins (SpliVaP) - data and characterization of changes in signatures among protein isoforms due to alternative splicing. Floris M; Orsini M; Thanaraj TA BMC Genomics; 2008 Oct; 9():453. PubMed ID: 18831736 [TBL] [Abstract][Full Text] [Related]
4. The implications of alternative splicing in the ENCODE protein complement. Tress ML; Martelli PL; Frankish A; Reeves GA; Wesselink JJ; Yeats C; Olason PI; Albrecht M; Hegyi H; Giorgetti A; Raimondo D; Lagarde J; Laskowski RA; López G; Sadowski MI; Watson JD; Fariselli P; Rossi I; Nagy A; Kai W; Størling Z; Orsini M; Assenov Y; Blankenburg H; Huthmacher C; Ramírez F; Schlicker A; Denoeud F; Jones P; Kerrien S; Orchard S; Antonarakis SE; Reymond A; Birney E; Brunak S; Casadio R; Guigo R; Harrow J; Hermjakob H; Jones DT; Lengauer T; Orengo CA; Patthy L; Thornton JM; Tramontano A; Valencia A Proc Natl Acad Sci U S A; 2007 Mar; 104(13):5495-500. PubMed ID: 17372197 [TBL] [Abstract][Full Text] [Related]
5. Alternatively Spliced Homologous Exons Have Ancient Origins and Are Highly Expressed at the Protein Level. Abascal F; Ezkurdia I; Rodriguez-Rivas J; Rodriguez JM; del Pozo A; Vázquez J; Valencia A; Tress ML PLoS Comput Biol; 2015 Jun; 11(6):e1004325. PubMed ID: 26061177 [TBL] [Abstract][Full Text] [Related]
6. Comparative proteomics reveals a significant bias toward alternative protein isoforms with conserved structure and function. Ezkurdia I; del Pozo A; Frankish A; Rodriguez JM; Harrow J; Ashman K; Valencia A; Tress ML Mol Biol Evol; 2012 Sep; 29(9):2265-83. PubMed ID: 22446687 [TBL] [Abstract][Full Text] [Related]
7. Structural genomics analysis of alternative splicing and application to isoform structure modeling. Wang P; Yan B; Guo JT; Hicks C; Xu Y Proc Natl Acad Sci U S A; 2005 Dec; 102(52):18920-5. PubMed ID: 16354838 [TBL] [Abstract][Full Text] [Related]
8. Alternative Splicing May Not Be the Key to Proteome Complexity. Tress ML; Abascal F; Valencia A Trends Biochem Sci; 2017 Feb; 42(2):98-110. PubMed ID: 27712956 [TBL] [Abstract][Full Text] [Related]
9. AS-EAST: a functional annotation tool for putative proteins encoded by alternatively spliced transcripts. Shionyu M; Takahashi K; Go M Bioinformatics; 2012 Aug; 28(15):2076-7. PubMed ID: 22645168 [TBL] [Abstract][Full Text] [Related]
10. Functional Dissection of an Alternatively Spliced Herpesvirus Gene by Splice Site Mutagenesis. Schommartz T; Loroch S; Alawi M; Grundhoff A; Sickmann A; Brune W J Virol; 2016 May; 90(9):4626-4636. PubMed ID: 26912612 [TBL] [Abstract][Full Text] [Related]
13. Alternative splicing in human transcriptome: functional and structural influence on proteins. Yura K; Shionyu M; Hagino K; Hijikata A; Hirashima Y; Nakahara T; Eguchi T; Shinoda K; Yamaguchi A; Takahashi K; Itoh T; Imanishi T; Gojobori T; Go M Gene; 2006 Oct; 380(2):63-71. PubMed ID: 16872759 [TBL] [Abstract][Full Text] [Related]
14. Plant Gene and Alternatively Spliced Variant Annotator. A plant genome annotation pipeline for rice gene and alternatively spliced variant identification with cross-species expressed sequence tag conservation from seven plant species. Chen FC; Wang SS; Chaw SM; Huang YT; Chuang TJ Plant Physiol; 2007 Mar; 143(3):1086-95. PubMed ID: 17220363 [TBL] [Abstract][Full Text] [Related]
15. PEPPI: a peptidomic database of human protein isoforms for proteomics experiments. Zhou A; Zhang F; Chen JY BMC Bioinformatics; 2010 Oct; 11 Suppl 6(Suppl 6):S7. PubMed ID: 20946618 [TBL] [Abstract][Full Text] [Related]
16. Assessment of orthologous splicing isoforms in human and mouse orthologous genes. Zambelli F; Pavesi G; Gissi C; Horner DS; Pesole G BMC Genomics; 2010 Oct; 11():534. PubMed ID: 20920313 [TBL] [Abstract][Full Text] [Related]
17. The tissue-specific, alternatively spliced single ATG exon of the type 3 voltage-dependent anion channel gene does not create a truncated protein isoform in vivo. Decker WK; Craigen WJ Mol Genet Metab; 2000 May; 70(1):69-74. PubMed ID: 10833333 [TBL] [Abstract][Full Text] [Related]
18. Functional regulation of alternatively spliced Na+/Ca2+ exchanger (NCX1) isoforms. Schulze DH; Polumuri SK; Gille T; Ruknudin A Ann N Y Acad Sci; 2002 Nov; 976():187-96. PubMed ID: 12502560 [TBL] [Abstract][Full Text] [Related]
19. Alternatively spliced human genes by exon skipping--a database (ASHESdb). Sakharkar MK; Perumal BS; Lim YP; Chern LP; Yu Y; Kangueane P In Silico Biol; 2005; 5(3):221-5. PubMed ID: 15984933 [TBL] [Abstract][Full Text] [Related]
20. ASPMF: a new approach for identifying alternative splicing isoforms using peptide mass fingerprinting. Lee SW; Choi JP; Kim HJ; Hong JM; Hur CG Biochem Biophys Res Commun; 2008 Dec; 377(1):253-6. PubMed ID: 18835246 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]