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3. Improved tools for biological sequence comparison. Pearson WR; Lipman DJ Proc Natl Acad Sci U S A; 1988 Apr; 85(8):2444-8. PubMed ID: 3162770 [TBL] [Abstract][Full Text] [Related]
4. Searching protein sequence libraries: comparison of the sensitivity and selectivity of the Smith-Waterman and FASTA algorithms. Pearson WR Genomics; 1991 Nov; 11(3):635-50. PubMed ID: 1774068 [TBL] [Abstract][Full Text] [Related]
5. FASTA-SWAP and FASTA-PAT: pattern database searches using combinations of aligned amino acids, and a novel scoring theory. Ladunga I; Wiese BA; Smith RF J Mol Biol; 1996 Jun; 259(4):840-54. PubMed ID: 8683587 [TBL] [Abstract][Full Text] [Related]
6. BLAST and FASTA similarity searching for multiple sequence alignment. Pearson WR Methods Mol Biol; 2014; 1079():75-101. PubMed ID: 24170396 [TBL] [Abstract][Full Text] [Related]
7. Flexible sequence similarity searching with the FASTA3 program package. Pearson WR Methods Mol Biol; 2000; 132():185-219. PubMed ID: 10547837 [TBL] [Abstract][Full Text] [Related]
8. Comparison of methods for searching protein sequence databases. Pearson WR Protein Sci; 1995 Jun; 4(6):1145-60. PubMed ID: 7549879 [TBL] [Abstract][Full Text] [Related]
9. A platform for biological sequence comparison on parallel computers. Deshpande AS; Richards DS; Pearson WR Comput Appl Biosci; 1991 Apr; 7(2):237-47. PubMed ID: 2059850 [TBL] [Abstract][Full Text] [Related]
10. Further evaluation of the utility of "sliding window" FASTA in predicting cross-reactivity with allergenic proteins. Cressman RF; Ladics G Regul Toxicol Pharmacol; 2009 Aug; 54(3 Suppl):S20-5. PubMed ID: 19114081 [TBL] [Abstract][Full Text] [Related]
11. Dynamic programming algorithms for biological sequence comparison. Pearson WR; Miller W Methods Enzymol; 1992; 210():575-601. PubMed ID: 1584052 [TBL] [Abstract][Full Text] [Related]
12. Finding Protein and Nucleotide Similarities with FASTA. Pearson WR Curr Protoc Bioinformatics; 2016 Mar; 53():3.9.1-3.9.25. PubMed ID: 27010337 [TBL] [Abstract][Full Text] [Related]
13. Visual BLAST and visual FASTA: graphic workbenches for interactive analysis of full BLAST and FASTA outputs under MICROSOFT WINDOWS 95/NT. Durand P; Canard L; Mornon JP Comput Appl Biosci; 1997 Aug; 13(4):407-13. PubMed ID: 9283755 [TBL] [Abstract][Full Text] [Related]
15. Cloning and characterization of rod opsin cDNA from the Old World monkey, Macaca fascicularis. Nickells RW; Burgoyne CF; Quigley HA; Zack DJ Invest Ophthalmol Vis Sci; 1995 Jan; 36(1):72-82. PubMed ID: 7822161 [TBL] [Abstract][Full Text] [Related]
16. Fast alignment of DNA and protein sequences. Landau GM; Vishkin U; Nussinov R Methods Enzymol; 1990; 183():487-502. PubMed ID: 2314289 [No Abstract] [Full Text] [Related]
18. Sensitivity and selectivity in protein similarity searches: a comparison of Smith-Waterman in hardware to BLAST and FASTA. Shpaer EG; Robinson M; Yee D; Candlin JD; Mines R; Hunkapiller T Genomics; 1996 Dec; 38(2):179-91. PubMed ID: 8954800 [TBL] [Abstract][Full Text] [Related]