These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

95 related articles for article (PubMed ID: 21609792)

  • 1. SPIRE: Systematic protein investigative research environment.
    Kolker E; Higdon R; Morgan P; Sedensky M; Welch D; Bauman A; Stewart E; Haynes W; Broomall W; Kolker N
    J Proteomics; 2011 Dec; 75(1):122-6. PubMed ID: 21609792
    [TBL] [Abstract][Full Text] [Related]  

  • 2. IPM: An integrated protein model for false discovery rate estimation and identification in high-throughput proteomics.
    Higdon R; Reiter L; Hather G; Haynes W; Kolker N; Stewart E; Bauman AT; Picotti P; Schmidt A; van Belle G; Aebersold R; Kolker E
    J Proteomics; 2011 Dec; 75(1):116-21. PubMed ID: 21718813
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The proteios software environment: an extensible multiuser platform for management and analysis of proteomics data.
    Häkkinen J; Vincic G; Månsson O; Wårell K; Levander F
    J Proteome Res; 2009 Jun; 8(6):3037-43. PubMed ID: 19354269
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Visualization and dissemination of multidimensional proteomics data comparing protein abundance during Caenorhabditis elegans development.
    Riffle M; Merrihew GE; Jaschob D; Sharma V; Davis TN; Noble WS; MacCoss MJ
    J Am Soc Mass Spectrom; 2015 Nov; 26(11):1827-36. PubMed ID: 26133526
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SearchGUI: An open-source graphical user interface for simultaneous OMSSA and X!Tandem searches.
    Vaudel M; Barsnes H; Berven FS; Sickmann A; Martens L
    Proteomics; 2011 Mar; 11(5):996-9. PubMed ID: 21337703
    [TBL] [Abstract][Full Text] [Related]  

  • 6. MOPED: Model Organism Protein Expression Database.
    Kolker E; Higdon R; Haynes W; Welch D; Broomall W; Lancet D; Stanberry L; Kolker N
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D1093-9. PubMed ID: 22139914
    [TBL] [Abstract][Full Text] [Related]  

  • 7. PIA: An Intuitive Protein Inference Engine with a Web-Based User Interface.
    Uszkoreit J; Maerkens A; Perez-Riverol Y; Meyer HE; Marcus K; Stephan C; Kohlbacher O; Eisenacher M
    J Proteome Res; 2015 Jul; 14(7):2988-97. PubMed ID: 25938255
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Proteomics in Caenorhabditis elegans.
    Audhya A; Desai A
    Brief Funct Genomic Proteomic; 2008 May; 7(3):205-10. PubMed ID: 18372286
    [TBL] [Abstract][Full Text] [Related]  

  • 9. C. elegans: an invaluable model organism for the proteomics studies of the cholesterol-mediated signaling pathway.
    Paik YK; Jeong SK; Lee EY; Jeong PY; Shim YH
    Expert Rev Proteomics; 2006 Aug; 3(4):439-53. PubMed ID: 16901202
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A collection of open source applications for mass spectrometry data mining.
    Gallardo Ó; Ovelleiro D; Gay M; Carrascal M; Abian J
    Proteomics; 2014 Oct; 14(20):2275-9. PubMed ID: 25055762
    [TBL] [Abstract][Full Text] [Related]  

  • 11. MitoP2: the mitochondrial proteome database--now including mouse data.
    Prokisch H; Andreoli C; Ahting U; Heiss K; Ruepp A; Scharfe C; Meitinger T
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D705-11. PubMed ID: 16381964
    [TBL] [Abstract][Full Text] [Related]  

  • 12. PCHM: A bioinformatic resource for high-throughput human mitochondrial proteome searching and comparison.
    Kim T; Kim E; Park SJ; Joo H
    Comput Biol Med; 2009 Aug; 39(8):689-96. PubMed ID: 19541297
    [TBL] [Abstract][Full Text] [Related]  

  • 13. ProteomeCommons.org IO Framework: reading and writing multiple proteomics data formats.
    Falkner JA; Falkner JW; Andrews PC
    Bioinformatics; 2007 Jan; 23(2):262-3. PubMed ID: 17121776
    [TBL] [Abstract][Full Text] [Related]  

  • 14. MOPED enables discoveries through consistently processed proteomics data.
    Higdon R; Stewart E; Stanberry L; Haynes W; Choiniere J; Montague E; Anderson N; Yandl G; Janko I; Broomall W; Fishilevich S; Lancet D; Kolker N; Kolker E
    J Proteome Res; 2014 Jan; 13(1):107-13. PubMed ID: 24350770
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Proteomics applications in Caenorhabditis elegans research.
    Husson SJ; Moyson S; Valkenborg D; Baggerman G; Mertens I
    Biochem Biophys Res Commun; 2015 Dec; 468(4):519-24. PubMed ID: 26585491
    [TBL] [Abstract][Full Text] [Related]  

  • 16. General framework for developing and evaluating database scoring algorithms using the TANDEM search engine.
    MacLean B; Eng JK; Beavis RC; McIntosh M
    Bioinformatics; 2006 Nov; 22(22):2830-2. PubMed ID: 16877754
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Reactome pathway analysis to enrich biological discovery in proteomics data sets.
    Haw R; Hermjakob H; D'Eustachio P; Stein L
    Proteomics; 2011 Sep; 11(18):3598-613. PubMed ID: 21751369
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A worm rich in protein: Quantitative, differential, and global proteomics in Caenorhabditis elegans.
    Schrimpf SP; Hengartner MO
    J Proteomics; 2010 Oct; 73(11):2186-97. PubMed ID: 20398808
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Quantitative proteomics as a new piece of the systems biology puzzle.
    Bachi A; Bonaldi T
    J Proteomics; 2008 Aug; 71(3):357-67. PubMed ID: 18640294
    [TBL] [Abstract][Full Text] [Related]  

  • 20. CellCircuits: a database of protein network models.
    Mak HC; Daly M; Gruebel B; Ideker T
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D538-45. PubMed ID: 17135207
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.