BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

180 related articles for article (PubMed ID: 21618018)

  • 1. relaxGUI: a new software for fast and simple NMR relaxation data analysis and calculation of ps-ns and μs motion of proteins.
    Bieri M; d'Auvergne EJ; Gooley PR
    J Biomol NMR; 2011 Jun; 50(2):147-55. PubMed ID: 21618018
    [TBL] [Abstract][Full Text] [Related]  

  • 2. relax: the analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data.
    Morin S; Linnet TE; Lescanne M; Schanda P; Thompson GS; Tollinger M; Teilum K; Gagné S; Marion D; Griesinger C; Blackledge M; d'Auvergne EJ
    Bioinformatics; 2014 Aug; 30(15):2219-20. PubMed ID: 24764461
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Automated NMR relaxation dispersion data analysis using NESSY.
    Bieri M; Gooley PR
    BMC Bioinformatics; 2011 Oct; 12():421. PubMed ID: 22032230
    [TBL] [Abstract][Full Text] [Related]  

  • 4. GUARDD: user-friendly MATLAB software for rigorous analysis of CPMG RD NMR data.
    Kleckner IR; Foster MP
    J Biomol NMR; 2012 Jan; 52(1):11-22. PubMed ID: 22160811
    [TBL] [Abstract][Full Text] [Related]  

  • 5. RING NMR dynamics: software for analysis of multiple NMR relaxation experiments.
    Beckwith MA; Erazo-Colon T; Johnson BA
    J Biomol NMR; 2021 Jan; 75(1):9-23. PubMed ID: 33098475
    [TBL] [Abstract][Full Text] [Related]  

  • 6. iPick: Multiprocessing software for integrated NMR signal detection and validation.
    Rahimi M; Lee Y; Markley JL; Lee W
    J Magn Reson; 2021 Jul; 328():106995. PubMed ID: 34004411
    [TBL] [Abstract][Full Text] [Related]  

  • 7. NMR dynamics of PSE-4 beta-lactamase: an interplay of ps-ns order and mus-ms motions in the active site.
    Morin S; Gagné SM
    Biophys J; 2009 Jun; 96(11):4681-91. PubMed ID: 19486690
    [TBL] [Abstract][Full Text] [Related]  

  • 8. General order parameter based correlation analysis of protein backbone motions between experimental NMR relaxation measurements and molecular dynamics simulations.
    Liu Q; Shi C; Yu L; Zhang L; Xiong Y; Tian C
    Biochem Biophys Res Commun; 2015 Feb; 457(3):467-72. PubMed ID: 25600810
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Deriving quantitative dynamics information for proteins and RNAs using ROTDIF with a graphical user interface.
    Berlin K; Longhini A; Dayie TK; Fushman D
    J Biomol NMR; 2013 Dec; 57(4):333-52. PubMed ID: 24170368
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Determination of Protein ps-ns Motions by High-Resolution Relaxometry.
    Cousin SF; Kadeřávek P; Bolik-Coulon N; Ferrage F
    Methods Mol Biol; 2018; 1688():169-203. PubMed ID: 29151210
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CING: an integrated residue-based structure validation program suite.
    Doreleijers JF; Sousa da Silva AW; Krieger E; Nabuurs SB; Spronk CA; Stevens TJ; Vranken WF; Vriend G; Vuister GW
    J Biomol NMR; 2012 Nov; 54(3):267-83. PubMed ID: 22986687
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Detection of nano-second internal motion and determination of overall tumbling times independent of the time scale of internal motion in proteins from NMR relaxation data.
    Larsson G; Martinez G; Schleucher J; Wijmenga SS
    J Biomol NMR; 2003 Dec; 27(4):291-312. PubMed ID: 14512728
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A fast and efficient python library for interfacing with the Biological Magnetic Resonance Data Bank.
    Smelter A; Astra M; Moseley HN
    BMC Bioinformatics; 2017 Mar; 18(1):175. PubMed ID: 28302053
    [TBL] [Abstract][Full Text] [Related]  

  • 14. CHARMM-GUI PDB manipulator for advanced modeling and simulations of proteins containing nonstandard residues.
    Jo S; Cheng X; Islam SM; Huang L; Rui H; Zhu A; Lee HS; Qi Y; Han W; Vanommeslaeghe K; MacKerell AD; Roux B; Im W
    Adv Protein Chem Struct Biol; 2014; 96():235-65. PubMed ID: 25443960
    [TBL] [Abstract][Full Text] [Related]  

  • 15. LiGRO: a graphical user interface for protein-ligand molecular dynamics.
    Kagami LP; das Neves GM; da Silva AWS; Caceres RA; Kawano DF; Eifler-Lima VL
    J Mol Model; 2017 Oct; 23(11):304. PubMed ID: 28980073
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.
    Herrmann T; Güntert P; Wüthrich K
    J Mol Biol; 2002 May; 319(1):209-27. PubMed ID: 12051947
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Comprehensive analysis of NMR data using advanced line shape fitting.
    Niklasson M; Otten R; Ahlner A; Andresen C; Schlagnitweit J; Petzold K; Lundström P
    J Biomol NMR; 2017 Oct; 69(2):93-99. PubMed ID: 29043470
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Mapping protein conformational energy landscapes using NMR and molecular simulation.
    Guerry P; Mollica L; Blackledge M
    Chemphyschem; 2013 Sep; 14(13):3046-58. PubMed ID: 23703956
    [TBL] [Abstract][Full Text] [Related]  

  • 19. ARIAweb: a server for automated NMR structure calculation.
    Allain F; Mareuil F; Ménager H; Nilges M; Bardiaux B
    Nucleic Acids Res; 2020 Jul; 48(W1):W41-W47. PubMed ID: 32383755
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Comprehensive description of NMR cross-correlated relaxation under anisotropic molecular tumbling and correlated local dynamics on all time scales.
    Vögeli B
    J Chem Phys; 2010 Jul; 133(1):014501. PubMed ID: 20614970
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.