580 related articles for article (PubMed ID: 21653252)
1. De novo discovery of mutated driver pathways in cancer.
Vandin F; Upfal E; Raphael BJ
Genome Res; 2012 Feb; 22(2):375-85. PubMed ID: 21653252
[TBL] [Abstract][Full Text] [Related]
2. Simultaneous identification of multiple driver pathways in cancer.
Leiserson MD; Blokh D; Sharan R; Raphael BJ
PLoS Comput Biol; 2013; 9(5):e1003054. PubMed ID: 23717195
[TBL] [Abstract][Full Text] [Related]
3. Identifying overlapping mutated driver pathways by constructing gene networks in cancer.
Wu H; Gao L; Li F; Song F; Yang X; Kasabov N
BMC Bioinformatics; 2015; 16 Suppl 5(Suppl 5):S3. PubMed ID: 25859819
[TBL] [Abstract][Full Text] [Related]
4. Identification of mutated core cancer modules by integrating somatic mutation, copy number variation, and gene expression data.
Zhang J; Zhang S; Wang Y; Zhang XS
BMC Syst Biol; 2013; 7 Suppl 2(Suppl 2):S4. PubMed ID: 24565034
[TBL] [Abstract][Full Text] [Related]
5. Simulated annealing based algorithm for identifying mutated driver pathways in cancer.
Li HT; Zhang YL; Zheng CH; Wang HQ
Biomed Res Int; 2014; 2014():375980. PubMed ID: 24982873
[TBL] [Abstract][Full Text] [Related]
6. Algorithms for detecting significantly mutated pathways in cancer.
Vandin F; Upfal E; Raphael BJ
J Comput Biol; 2011 Mar; 18(3):507-22. PubMed ID: 21385051
[TBL] [Abstract][Full Text] [Related]
7. DrGaP: a powerful tool for identifying driver genes and pathways in cancer sequencing studies.
Hua X; Xu H; Yang Y; Zhu J; Liu P; Lu Y
Am J Hum Genet; 2013 Sep; 93(3):439-51. PubMed ID: 23954162
[TBL] [Abstract][Full Text] [Related]
8. Discovery of mutated subnetworks associated with clinical data in cancer.
Vandin F; Clay P; Upfal E; Raphael BJ
Pac Symp Biocomput; 2012; ():55-66. PubMed ID: 22174262
[TBL] [Abstract][Full Text] [Related]
9. QuaDMutNetEx: a method for detecting cancer driver genes with low mutation frequency.
Bokhari Y; Alhareeri A; Arodz T
BMC Bioinformatics; 2020 Mar; 21(1):122. PubMed ID: 32293263
[TBL] [Abstract][Full Text] [Related]
10. Identification of driver pathways in cancer based on combinatorial patterns of somatic gene mutations.
Li HT; Zhang J; Xia J; Zheng CH
Neoplasma; 2016; 63(1):57-63. PubMed ID: 26639234
[TBL] [Abstract][Full Text] [Related]
11. Detection of driver pathways using mutated gene network in cancer.
Li F; Gao L; Ma X; Yang X
Mol Biosyst; 2016 Jun; 12(7):2135-41. PubMed ID: 27118146
[TBL] [Abstract][Full Text] [Related]
12. Distinguishing between driver and passenger mutations in individual cancer genomes by network enrichment analysis.
Merid SK; Goranskaya D; Alexeyenko A
BMC Bioinformatics; 2014 Sep; 15(1):308. PubMed ID: 25236784
[TBL] [Abstract][Full Text] [Related]
13. Identification of mutated driver pathways in cancer using a multi-objective optimization model.
Zheng CH; Yang W; Chong YW; Xia JF
Comput Biol Med; 2016 May; 72():22-9. PubMed ID: 26995027
[TBL] [Abstract][Full Text] [Related]
14. The Discovery of Mutated Driver Pathways in Cancer: Models and Algorithms.
Zhang J; Zhang S
IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(3):988-998. PubMed ID: 28113329
[TBL] [Abstract][Full Text] [Related]
15. Identifying driver mutations from sequencing data of heterogeneous tumors in the era of personalized genome sequencing.
Zhang J; Liu J; Sun J; Chen C; Foltz G; Lin B
Brief Bioinform; 2014 Mar; 15(2):244-55. PubMed ID: 23818492
[TBL] [Abstract][Full Text] [Related]
16. Finding driver pathways in cancer: models and algorithms.
Vandin F; Upfal E; Raphael BJ
Algorithms Mol Biol; 2012 Sep; 7(1):23. PubMed ID: 22954134
[TBL] [Abstract][Full Text] [Related]
17. Identifying Driver Genomic Alterations in Cancers by Searching Minimum-Weight, Mutually Exclusive Sets.
Lu S; Lu KN; Cheng SY; Hu B; Ma X; Nystrom N; Lu X
PLoS Comput Biol; 2015 Aug; 11(8):e1004257. PubMed ID: 26317392
[TBL] [Abstract][Full Text] [Related]
18. MEScan: a powerful statistical framework for genome-scale mutual exclusivity analysis of cancer mutations.
Liu S; Liu J; Xie Y; Zhai T; Hinderer EW; Stromberg AJ; Vanderford NL; Kolesar JM; Moseley HNB; Chen L; Liu C; Wang C
Bioinformatics; 2021 Jun; 37(9):1189-1197. PubMed ID: 33165532
[TBL] [Abstract][Full Text] [Related]
19. VarWalker: personalized mutation network analysis of putative cancer genes from next-generation sequencing data.
Jia P; Zhao Z
PLoS Comput Biol; 2014 Feb; 10(2):e1003460. PubMed ID: 24516372
[TBL] [Abstract][Full Text] [Related]
20. Detection of Driver Modules with Rarely Mutated Genes in Cancers.
Li F; Gao L; Wang B
IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(2):390-401. PubMed ID: 29994261
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]