239 related articles for article (PubMed ID: 21678914)
1. Effectiveness of CID, HCD, and ETD with FT MS/MS for degradomic-peptidomic analysis: comparison of peptide identification methods.
Shen Y; Tolić N; Xie F; Zhao R; Purvine SO; Schepmoes AA; Moore RJ; Anderson GA; Smith RD
J Proteome Res; 2011 Sep; 10(9):3929-43. PubMed ID: 21678914
[TBL] [Abstract][Full Text] [Related]
2. Improving collision induced dissociation (CID), high energy collision dissociation (HCD), and electron transfer dissociation (ETD) fourier transform MS/MS degradome-peptidome identifications using high accuracy mass information.
Shen Y; Tolić N; Purvine SO; Smith RD
J Proteome Res; 2012 Feb; 11(2):668-77. PubMed ID: 22054047
[TBL] [Abstract][Full Text] [Related]
3. Improved peptide identification by targeted fragmentation using CID, HCD and ETD on an LTQ-Orbitrap Velos.
Frese CK; Altelaar AF; Hennrich ML; Nolting D; Zeller M; Griep-Raming J; Heck AJ; Mohammed S
J Proteome Res; 2011 May; 10(5):2377-88. PubMed ID: 21413819
[TBL] [Abstract][Full Text] [Related]
4. Analysis of low complex region peptides derived from mollusk shell matrix proteins using CID, high-energy collisional dissociation, and electron transfer dissociation on an LTQ-orbitrap: implications for peptide to spectrum match.
Marie A; Alves S; Marie B; Dubost L; Bédouet L; Berland S
Proteomics; 2012 Oct; 12(19-20):3069-75. PubMed ID: 22888092
[TBL] [Abstract][Full Text] [Related]
5. Enhanced peptide identification by electron transfer dissociation using an improved Mascot Percolator.
Wright JC; Collins MO; Yu L; Käll L; Brosch M; Choudhary JS
Mol Cell Proteomics; 2012 Aug; 11(8):478-91. PubMed ID: 22493177
[TBL] [Abstract][Full Text] [Related]
6. Mass spectrometric de novo sequencing of natural non-tryptic peptides: comparing peculiarities of collision-induced dissociation (CID) and high energy collision dissociation (HCD).
Samgina TY; Vorontsov EA; Gorshkov VA; Artemenko KA; Zubarev RA; Lebedev AT
Rapid Commun Mass Spectrom; 2014 Dec; 28(23):2595-604. PubMed ID: 25366406
[TBL] [Abstract][Full Text] [Related]
7. On-line LC-MS approach combining collision-induced dissociation (CID), electron-transfer dissociation (ETD), and CID of an isolated charge-reduced species for the trace-level characterization of proteins with post-translational modifications.
Wu SL; Hühmer AF; Hao Z; Karger BL
J Proteome Res; 2007 Nov; 6(11):4230-44. PubMed ID: 17900180
[TBL] [Abstract][Full Text] [Related]
8. Optimization of Search Engines and Postprocessing Approaches to Maximize Peptide and Protein Identification for High-Resolution Mass Data.
Tu C; Sheng Q; Li J; Ma D; Shen X; Wang X; Shyr Y; Yi Z; Qu J
J Proteome Res; 2015 Nov; 14(11):4662-73. PubMed ID: 26390080
[TBL] [Abstract][Full Text] [Related]
9. Gaining efficiency by parallel quantification and identification of iTRAQ-labeled peptides using HCD and decision tree guided CID/ETD on an LTQ Orbitrap.
Mischerikow N; van Nierop P; Li KW; Bernstein HG; Smit AB; Heck AJ; Altelaar AF
Analyst; 2010 Oct; 135(10):2643-52. PubMed ID: 20714520
[TBL] [Abstract][Full Text] [Related]
10. Large-scale identification of endogenous secretory peptides using electron transfer dissociation mass spectrometry.
Sasaki K; Osaki T; Minamino N
Mol Cell Proteomics; 2013 Mar; 12(3):700-9. PubMed ID: 23250050
[TBL] [Abstract][Full Text] [Related]
11. The generating function of CID, ETD, and CID/ETD pairs of tandem mass spectra: applications to database search.
Kim S; Mischerikow N; Bandeira N; Navarro JD; Wich L; Mohammed S; Heck AJ; Pevzner PA
Mol Cell Proteomics; 2010 Dec; 9(12):2840-52. PubMed ID: 20829449
[TBL] [Abstract][Full Text] [Related]
12. De novo peptide sequencing using CID and HCD spectra pairs.
Yan Y; Kusalik AJ; Wu FX
Proteomics; 2016 Oct; 16(20):2615-2624. PubMed ID: 27402425
[TBL] [Abstract][Full Text] [Related]
13. Improved peptide identification for proteomic analysis based on comprehensive characterization of electron transfer dissociation spectra.
Sun RX; Dong MQ; Song CQ; Chi H; Yang B; Xiu LY; Tao L; Jing ZY; Liu C; Wang LH; Fu Y; He SM
J Proteome Res; 2010 Dec; 9(12):6354-67. PubMed ID: 20883037
[TBL] [Abstract][Full Text] [Related]
14. pNovo+: de novo peptide sequencing using complementary HCD and ETD tandem mass spectra.
Chi H; Chen H; He K; Wu L; Yang B; Sun RX; Liu J; Zeng WF; Song CQ; He SM; Dong MQ
J Proteome Res; 2013 Feb; 12(2):615-25. PubMed ID: 23272783
[TBL] [Abstract][Full Text] [Related]
15. pNovo: de novo peptide sequencing and identification using HCD spectra.
Chi H; Sun RX; Yang B; Song CQ; Wang LH; Liu C; Fu Y; Yuan ZF; Wang HP; He SM; Dong MQ
J Proteome Res; 2010 May; 9(5):2713-24. PubMed ID: 20329752
[TBL] [Abstract][Full Text] [Related]
16. Automated phosphopeptide identification using multiple MS/MS fragmentation modes.
Vandenbogaert M; Hourdel V; Jardin-Mathé O; Bigeard J; Bonhomme L; Legros V; Hirt H; Schwikowski B; Pflieger D
J Proteome Res; 2012 Dec; 11(12):5695-703. PubMed ID: 23094866
[TBL] [Abstract][Full Text] [Related]
17. Comparison of data analysis parameters and MS/MS fragmentation techniques for quantitative proteome analysis using isobaric peptide termini labeling (IPTL).
Koehler CJ; Arntzen MØ; Treumann A; Thiede B
Anal Bioanal Chem; 2012 Sep; 404(4):1103-14. PubMed ID: 22460078
[TBL] [Abstract][Full Text] [Related]
18. Combining low- and high-energy tandem mass spectra for optimized peptide quantification with isobaric tags.
Dayon L; Pasquarello C; Hoogland C; Sanchez JC; Scherl A
J Proteomics; 2010 Feb; 73(4):769-77. PubMed ID: 19903544
[TBL] [Abstract][Full Text] [Related]
19. Sequencing-grade de novo analysis of MS/MS triplets (CID/HCD/ETD) from overlapping peptides.
Guthals A; Clauser KR; Frank AM; Bandeira N
J Proteome Res; 2013 Jun; 12(6):2846-57. PubMed ID: 23679345
[TBL] [Abstract][Full Text] [Related]
20. Simultaneous glycan-peptide characterization using hydrophilic interaction chromatography and parallel fragmentation by CID, higher energy collisional dissociation, and electron transfer dissociation MS applied to the N-linked glycoproteome of Campylobacter jejuni.
Scott NE; Parker BL; Connolly AM; Paulech J; Edwards AV; Crossett B; Falconer L; Kolarich D; Djordjevic SP; Højrup P; Packer NH; Larsen MR; Cordwell SJ
Mol Cell Proteomics; 2011 Feb; 10(2):M000031-MCP201. PubMed ID: 20360033
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
