678 related articles for article (PubMed ID: 21679412)
1. Clinical relevance of DNA microarray analyses using archival formalin-fixed paraffin-embedded breast cancer specimens.
Sadi AM; Wang DY; Youngson BJ; Miller N; Boerner S; Done SJ; Leong WL
BMC Cancer; 2011 Jun; 11():253:1-13. PubMed ID: 21679412
[TBL] [Abstract][Full Text] [Related]
2. Reliable gene expression profiling of formalin-fixed paraffin-embedded breast cancer tissue (FFPE) using cDNA-mediated annealing, extension, selection, and ligation whole-genome (DASL WG) assay.
Iddawela M; Rueda OM; Klarqvist M; Graf S; Earl HM; Caldas C
BMC Med Genomics; 2016 Aug; 9(1):54. PubMed ID: 27542606
[TBL] [Abstract][Full Text] [Related]
3. Gene expression profiles from formalin fixed paraffin embedded breast cancer tissue are largely comparable to fresh frozen matched tissue.
Mittempergher L; de Ronde JJ; Nieuwland M; Kerkhoven RM; Simon I; Rutgers EJ; Wessels LF; Van't Veer LJ
PLoS One; 2011 Feb; 6(2):e17163. PubMed ID: 21347257
[TBL] [Abstract][Full Text] [Related]
4. Molecular characterisation of formalin-fixed paraffin-embedded (FFPE) breast tumour specimens using a custom 512-gene breast cancer bead array-based platform.
Abramovitz M; Barwick BG; Willis S; Young B; Catzavelos C; Li Z; Kodani M; Tang W; Bouzyk M; Moreno CS; Leyland-Jones B
Br J Cancer; 2011 Nov; 105(10):1574-81. PubMed ID: 22067903
[TBL] [Abstract][Full Text] [Related]
5. Analyses and interpretation of whole-genome gene expression from formalin-fixed paraffin-embedded tissue: an illustration with breast cancer tissues.
Kibriya MG; Jasmine F; Roy S; Paul-Brutus RM; Argos M; Ahsan H
BMC Genomics; 2010 Nov; 11():622. PubMed ID: 21059268
[TBL] [Abstract][Full Text] [Related]
6. Preparation of archival formalin-fixed paraffin-embedded mouse liver samples for use with the Agilent gene expression microarray platform.
Jackson AF; Williams A; Moffat I; Phillips SL; Recio L; Waters MD; Lambert IB; Yauk CL
J Pharmacol Toxicol Methods; 2013; 68(2):260-268. PubMed ID: 23458726
[TBL] [Abstract][Full Text] [Related]
7. Integrative analysis of copy number and gene expression in breast cancer using formalin-fixed paraffin-embedded core biopsy tissue: a feasibility study.
Iddawela M; Rueda O; Eremin J; Eremin O; Cowley J; Earl HM; Caldas C
BMC Genomics; 2017 Jul; 18(1):526. PubMed ID: 28697743
[TBL] [Abstract][Full Text] [Related]
8. Gene expression profiling of formalin-fixed, paraffin-embedded familial breast tumours using the whole genome-DASL assay.
Waddell N; Cocciardi S; Johnson J; Healey S; Marsh A; Riley J; da Silva L; Vargas AC; Reid L; ; Simpson PT; Lakhani SR; Chenevix-Trench G
J Pathol; 2010 Aug; 221(4):452-61. PubMed ID: 20593485
[TBL] [Abstract][Full Text] [Related]
9. RNA-seq from archival FFPE breast cancer samples: molecular pathway fidelity and novel discovery.
Pennock ND; Jindal S; Horton W; Sun D; Narasimhan J; Carbone L; Fei SS; Searles R; Harrington CA; Burchard J; Weinmann S; Schedin P; Xia Z
BMC Med Genomics; 2019 Dec; 12(1):195. PubMed ID: 31856832
[TBL] [Abstract][Full Text] [Related]
10. 72-gene classifier for predicting prognosis of estrogen receptor-positive and node-negative breast cancer patients using formalin-fixed, paraffin-embedded tumor tissues.
Nishio M; Naoi Y; Tsunashima R; Nakauchi C; Kagara N; Shimoda M; Shimomura A; Maruyama N; Shimazu K; Kim SJ; Noguchi S
Clin Breast Cancer; 2014 Jun; 14(3):e73-80. PubMed ID: 24461457
[TBL] [Abstract][Full Text] [Related]
11. Technical validation of an RT-qPCR in vitro diagnostic test system for the determination of breast cancer molecular subtypes by quantification of ERBB2, ESR1, PGR and MKI67 mRNA levels from formalin-fixed paraffin-embedded breast tumor specimens.
Laible M; Schlombs K; Kaiser K; Veltrup E; Herlein S; Lakis S; Stöhr R; Eidt S; Hartmann A; Wirtz RM; Sahin U
BMC Cancer; 2016 Jul; 16():398. PubMed ID: 27389414
[TBL] [Abstract][Full Text] [Related]
12. A methodological study of genome-wide DNA methylation analyses using matched archival formalin-fixed paraffin embedded and fresh frozen breast tumors.
Espinal AC; Wang D; Yan L; Liu S; Tang L; Hu Q; Morrison CD; Ambrosone CB; Higgins MJ; Sucheston-Campbell LE
Oncotarget; 2017 Feb; 8(9):14821-14829. PubMed ID: 28118602
[TBL] [Abstract][Full Text] [Related]
13. Clinical relevance of Ki67 gene expression analysis using formalin-fixed paraffin-embedded breast cancer specimens.
Yamamoto S; Ibusuki M; Yamamoto Y; Fu P; Fujiwara S; Murakami K; Iwase H
Breast Cancer; 2013 Jul; 20(3):262-70. PubMed ID: 22362219
[TBL] [Abstract][Full Text] [Related]
14. Illumina whole-genome complementary DNA-mediated annealing, selection, extension and ligation platform: assessing its performance in formalin-fixed, paraffin-embedded samples and identifying invasion pattern-related genes in oral squamous cell carcinoma.
Loudig O; Brandwein-Gensler M; Kim RS; Lin J; Isayeva T; Liu C; Segall JE; Kenny PA; Prystowsky MB
Hum Pathol; 2011 Dec; 42(12):1911-22. PubMed ID: 21683979
[TBL] [Abstract][Full Text] [Related]
15. Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues.
Webster AF; Zumbo P; Fostel J; Gandara J; Hester SD; Recio L; Williams A; Wood CE; Yauk CL; Mason CE
Toxicol Sci; 2015 Dec; 148(2):460-72. PubMed ID: 26361796
[TBL] [Abstract][Full Text] [Related]
16. Whole-genome gene expression profiling of formalin-fixed, paraffin-embedded tissue samples.
April C; Klotzle B; Royce T; Wickham-Garcia E; Boyaniwsky T; Izzo J; Cox D; Jones W; Rubio R; Holton K; Matulonis U; Quackenbush J; Fan JB
PLoS One; 2009 Dec; 4(12):e8162. PubMed ID: 19997620
[TBL] [Abstract][Full Text] [Related]
17. Genome-wide gene expression profiling of formalin-fixed paraffin-embedded breast cancer core biopsies using microarrays.
Budczies J; Weichert W; Noske A; Müller BM; Weller C; Wittenberger T; Hofmann HP; Dietel M; Denkert C; Gekeler V
J Histochem Cytochem; 2011 Feb; 59(2):146-57. PubMed ID: 21339180
[TBL] [Abstract][Full Text] [Related]
18. Quantitative expression profiling of highly degraded RNA from formalin-fixed, paraffin-embedded breast tumor biopsies by oligonucleotide microarrays.
Ravo M; Mutarelli M; Ferraro L; Grober OM; Paris O; Tarallo R; Vigilante A; Cimino D; De Bortoli M; Nola E; Cicatiello L; Weisz A
Lab Invest; 2008 Apr; 88(4):430-40. PubMed ID: 18305565
[TBL] [Abstract][Full Text] [Related]
19. Establishment of a standardized gene-expression analysis system using formalin-fixed, paraffin-embedded, breast cancer specimens.
Ibusuki M; Fu P; Yamamoto S; Fujiwara S; Yamamoto Y; Honda Y; Iyama K; Iwase H
Breast Cancer; 2013 Apr; 20(2):159-66. PubMed ID: 22139726
[TBL] [Abstract][Full Text] [Related]
20. The impact of RNA extraction method on accurate RNA sequencing from formalin-fixed paraffin-embedded tissues.
Marczyk M; Fu C; Lau R; Du L; Trevarton AJ; Sinn BV; Gould RE; Pusztai L; Hatzis C; Symmans WF
BMC Cancer; 2019 Dec; 19(1):1189. PubMed ID: 31805884
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]