536 related articles for article (PubMed ID: 21689397)
1. 5-Hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells.
Stroud H; Feng S; Morey Kinney S; Pradhan S; Jacobsen SE
Genome Biol; 2011 Jun; 12(6):R54. PubMed ID: 21689397
[TBL] [Abstract][Full Text] [Related]
2. 5-hydroxymethylcytosine represses the activity of enhancers in embryonic stem cells: a new epigenetic signature for gene regulation.
Choi I; Kim R; Lim HW; Kaestner KH; Won KJ
BMC Genomics; 2014 Aug; 15(1):670. PubMed ID: 25106691
[TBL] [Abstract][Full Text] [Related]
3. Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells.
Pastor WA; Pape UJ; Huang Y; Henderson HR; Lister R; Ko M; McLoughlin EM; Brudno Y; Mahapatra S; Kapranov P; Tahiliani M; Daley GQ; Liu XS; Ecker JR; Milos PM; Agarwal S; Rao A
Nature; 2011 May; 473(7347):394-7. PubMed ID: 21552279
[TBL] [Abstract][Full Text] [Related]
4. Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells.
Wu H; D'Alessio AC; Ito S; Wang Z; Cui K; Zhao K; Sun YE; Zhang Y
Genes Dev; 2011 Apr; 25(7):679-84. PubMed ID: 21460036
[TBL] [Abstract][Full Text] [Related]
5. Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation.
Ficz G; Branco MR; Seisenberger S; Santos F; Krueger F; Hore TA; Marques CJ; Andrews S; Reik W
Nature; 2011 May; 473(7347):398-402. PubMed ID: 21460836
[TBL] [Abstract][Full Text] [Related]
6. Comprehensive evaluation of genome-wide 5-hydroxymethylcytosine profiling approaches in human DNA.
Skvortsova K; Zotenko E; Luu PL; Gould CM; Nair SS; Clark SJ; Stirzaker C
Epigenetics Chromatin; 2017; 10():16. PubMed ID: 28428825
[TBL] [Abstract][Full Text] [Related]
7. High-resolution enzymatic mapping of genomic 5-hydroxymethylcytosine in mouse embryonic stem cells.
Sun Z; Terragni J; Borgaro JG; Liu Y; Yu L; Guan S; Wang H; Sun D; Cheng X; Zhu Z; Pradhan S; Zheng Y
Cell Rep; 2013 Feb; 3(2):567-76. PubMed ID: 23352666
[TBL] [Abstract][Full Text] [Related]
8. Lead exposure induces changes in 5-hydroxymethylcytosine clusters in CpG islands in human embryonic stem cells and umbilical cord blood.
Sen A; Cingolani P; Senut MC; Land S; Mercado-Garcia A; Tellez-Rojo MM; Baccarelli AA; Wright RO; Ruden DM
Epigenetics; 2015; 10(7):607-21. PubMed ID: 26046694
[TBL] [Abstract][Full Text] [Related]
9. Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome.
Yu M; Hon GC; Szulwach KE; Song CX; Zhang L; Kim A; Li X; Dai Q; Shen Y; Park B; Min JH; Jin P; Ren B; He C
Cell; 2012 Jun; 149(6):1368-80. PubMed ID: 22608086
[TBL] [Abstract][Full Text] [Related]
10. A human tissue map of 5-hydroxymethylcytosines exhibits tissue specificity through gene and enhancer modulation.
Cui XL; Nie J; Ku J; Dougherty U; West-Szymanski DC; Collin F; Ellison CK; Sieh L; Ning Y; Deng Z; Zhao CWT; Bergamaschi A; Pekow J; Wei J; Beadell AV; Zhang Z; Sharma G; Talwar R; Arensdorf P; Karpus J; Goel A; Bissonnette M; Zhang W; Levy S; He C
Nat Commun; 2020 Dec; 11(1):6161. PubMed ID: 33268789
[TBL] [Abstract][Full Text] [Related]
11. Genome-wide regulation of 5hmC, 5mC, and gene expression by Tet1 hydroxylase in mouse embryonic stem cells.
Xu Y; Wu F; Tan L; Kong L; Xiong L; Deng J; Barbera AJ; Zheng L; Zhang H; Huang S; Min J; Nicholson T; Chen T; Xu G; Shi Y; Zhang K; Shi YG
Mol Cell; 2011 May; 42(4):451-64. PubMed ID: 21514197
[TBL] [Abstract][Full Text] [Related]
12. Cooperative Action between SALL4A and TET Proteins in Stepwise Oxidation of 5-Methylcytosine.
Xiong J; Zhang Z; Chen J; Huang H; Xu Y; Ding X; Zheng Y; Nishinakamura R; Xu GL; Wang H; Chen S; Gao S; Zhu B
Mol Cell; 2016 Dec; 64(5):913-925. PubMed ID: 27840027
[TBL] [Abstract][Full Text] [Related]
13. Genome-wide comparison of DNA hydroxymethylation in mouse embryonic stem cells and neural progenitor cells by a new comparative hMeDIP-seq method.
Tan L; Xiong L; Xu W; Wu F; Huang N; Xu Y; Kong L; Zheng L; Schwartz L; Shi Y; Shi YG
Nucleic Acids Res; 2013 Apr; 41(7):e84. PubMed ID: 23408859
[TBL] [Abstract][Full Text] [Related]
14. Tet1 and 5-hydroxymethylation: a genome-wide view in mouse embryonic stem cells.
Wu H; Zhang Y
Cell Cycle; 2011 Aug; 10(15):2428-36. PubMed ID: 21750410
[TBL] [Abstract][Full Text] [Related]
15. Tet1 and Tet2 regulate 5-hydroxymethylcytosine production and cell lineage specification in mouse embryonic stem cells.
Koh KP; Yabuuchi A; Rao S; Huang Y; Cunniff K; Nardone J; Laiho A; Tahiliani M; Sommer CA; Mostoslavsky G; Lahesmaa R; Orkin SH; Rodig SJ; Daley GQ; Rao A
Cell Stem Cell; 2011 Feb; 8(2):200-13. PubMed ID: 21295276
[TBL] [Abstract][Full Text] [Related]
16. Stable 5-Hydroxymethylcytosine (5hmC) Acquisition Marks Gene Activation During Chondrogenic Differentiation.
Taylor SE; Li YH; Smeriglio P; Rath M; Wong WH; Bhutani N
J Bone Miner Res; 2016 Mar; 31(3):524-34. PubMed ID: 26363184
[TBL] [Abstract][Full Text] [Related]
17. A sensitive approach to map genome-wide 5-hydroxymethylcytosine and 5-formylcytosine at single-base resolution.
Sun Z; Dai N; Borgaro JG; Quimby A; Sun D; Corrêa IR; Zheng Y; Zhu Z; Guan S
Mol Cell; 2015 Feb; 57(4):750-761. PubMed ID: 25639471
[TBL] [Abstract][Full Text] [Related]
18. The histone deacetylase SIRT6 controls embryonic stem cell fate via TET-mediated production of 5-hydroxymethylcytosine.
Etchegaray JP; Chavez L; Huang Y; Ross KN; Choi J; Martinez-Pastor B; Walsh RM; Sommer CA; Lienhard M; Gladden A; Kugel S; Silberman DM; Ramaswamy S; Mostoslavsky G; Hochedlinger K; Goren A; Rao A; Mostoslavsky R
Nat Cell Biol; 2015 May; 17(5):545-57. PubMed ID: 25915124
[TBL] [Abstract][Full Text] [Related]
19. Chromosome-wide regulation of euchromatin-specific 5mC to 5hmC conversion in mouse ES cells and female human somatic cells.
Kubiura M; Okano M; Kimura H; Kawamura F; Tada M
Chromosome Res; 2012 Oct; 20(7):837-48. PubMed ID: 23111490
[TBL] [Abstract][Full Text] [Related]
20. Mapping 5-Hydroxymethylcytosine (5hmC) Modifications in Skeletal Tissues Using High-Throughput Sequencing.
Grandi FC; Bhutani N
Methods Mol Biol; 2021; 2221():101-108. PubMed ID: 32979201
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
