These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

145 related articles for article (PubMed ID: 21693559)

  • 1. KINARI-Web: a server for protein rigidity analysis.
    Fox N; Jagodzinski F; Li Y; Streinu I
    Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W177-83. PubMed ID: 21693559
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Using rigidity analysis to probe mutation-induced structural changes in proteins.
    Jagodzinski F; Hardy J; Streinu I
    J Bioinform Comput Biol; 2012 Jun; 10(3):1242010. PubMed ID: 22809386
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Rigidity analysis of protein biological assemblies and periodic crystal structures.
    Jagodzinski F; Clark P; Grant J; Liu T; Monastra S; Streinu I
    BMC Bioinformatics; 2013; 14 Suppl 18(Suppl 18):S2. PubMed ID: 24564201
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Towards accurate modeling of noncovalent interactions for protein rigidity analysis.
    Fox N; Streinu I
    BMC Bioinformatics; 2013; 14 Suppl 18(Suppl 18):S3. PubMed ID: 24564209
    [TBL] [Abstract][Full Text] [Related]  

  • 5. CNA web server: rigidity theory-based thermal unfolding simulations of proteins for linking structure, (thermo-)stability, and function.
    Krüger DM; Rathi PC; Pfleger C; Gohlke H
    Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W340-8. PubMed ID: 23609541
    [TBL] [Abstract][Full Text] [Related]  

  • 6. iMolTalk: an interactive, internet-based protein structure analysis server.
    Diemand AV; Scheib H
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W512-6. PubMed ID: 15215439
    [TBL] [Abstract][Full Text] [Related]  

  • 7. 3Drefine: an interactive web server for efficient protein structure refinement.
    Bhattacharya D; Nowotny J; Cao R; Cheng J
    Nucleic Acids Res; 2016 Jul; 44(W1):W406-9. PubMed ID: 27131371
    [TBL] [Abstract][Full Text] [Related]  

  • 8. WebSTAR3D: a web server for RNA 3D structural alignment.
    Holzhauser E; Ge P; Zhang S
    Bioinformatics; 2016 Dec; 32(23):3673-3675. PubMed ID: 27497443
    [TBL] [Abstract][Full Text] [Related]  

  • 9. TMpro web server and web service: transmembrane helix prediction through amino acid property analysis.
    Ganapathiraju M; Jursa CJ; Karimi HA; Klein-Seetharaman J
    Bioinformatics; 2007 Oct; 23(20):2795-6. PubMed ID: 17724062
    [TBL] [Abstract][Full Text] [Related]  

  • 10. ProBiS-2012: web server and web services for detection of structurally similar binding sites in proteins.
    Konc J; Janezic D
    Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W214-21. PubMed ID: 22600737
    [TBL] [Abstract][Full Text] [Related]  

  • 11. PDB-tools web: A user-friendly interface for the manipulation of PDB files.
    Jiménez-García B; Teixeira JMC; Trellet M; Rodrigues JPGLM; Bonvin AMJJ
    Proteins; 2021 Mar; 89(3):330-335. PubMed ID: 33111403
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SITEHOUND-web: a server for ligand binding site identification in protein structures.
    Hernandez M; Ghersi D; Sanchez R
    Nucleic Acids Res; 2009 Jul; 37(Web Server issue):W413-6. PubMed ID: 19398430
    [TBL] [Abstract][Full Text] [Related]  

  • 13. DeepKa Web Server: High-Throughput Protein p
    Cai Z; Peng H; Sun S; He J; Luo F; Huang Y
    J Chem Inf Model; 2024 Apr; 64(8):2933-2940. PubMed ID: 38530291
    [TBL] [Abstract][Full Text] [Related]  

  • 14. PepBuild: a web server for building structure data of peptides/proteins.
    Singh B
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W559-61. PubMed ID: 15215449
    [TBL] [Abstract][Full Text] [Related]  

  • 15. ProteinsPlus: a web portal for structure analysis of macromolecules.
    Fährrolfes R; Bietz S; Flachsenberg F; Meyder A; Nittinger E; Otto T; Volkamer A; Rarey M
    Nucleic Acids Res; 2017 Jul; 45(W1):W337-W343. PubMed ID: 28472372
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Protein Repair and Analysis Server: A Web Server to Repair PDB Structures, Add Missing Heavy Atoms and Hydrogen Atoms, and Assign Secondary Structures by Amide Interactions.
    Nnyigide OS; Nnyigide TO; Lee SG; Hyun K
    J Chem Inf Model; 2022 Sep; 62(17):4232-4246. PubMed ID: 36000562
    [TBL] [Abstract][Full Text] [Related]  

  • 17. SChiSM2: creating interactive web page annotations of molecular structure models using Jmol.
    Cammer S
    Bioinformatics; 2007 Feb; 23(3):383-4. PubMed ID: 17204464
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Large scale rigidity-based flexibility analysis of biomolecules.
    Streinu I
    Struct Dyn; 2016 Jan; 3(1):012005. PubMed ID: 26958583
    [TBL] [Abstract][Full Text] [Related]  

  • 19. KoBaMIN: a knowledge-based minimization web server for protein structure refinement.
    Rodrigues JP; Levitt M; Chopra G
    Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W323-8. PubMed ID: 22564897
    [TBL] [Abstract][Full Text] [Related]  

  • 20. ANCHOR: a web server and database for analysis of protein-protein interaction binding pockets for drug discovery.
    Meireles LM; Dömling AS; Camacho CJ
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W407-11. PubMed ID: 20525787
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.