170 related articles for article (PubMed ID: 21795381)
1. Efficient internal exon recognition depends on near equal contributions from the 3' and 5' splice sites.
Shepard PJ; Choi EA; Busch A; Hertel KJ
Nucleic Acids Res; 2011 Nov; 39(20):8928-37. PubMed ID: 21795381
[TBL] [Abstract][Full Text] [Related]
2. The architecture of pre-mRNAs affects mechanisms of splice-site pairing.
Fox-Walsh KL; Dou Y; Lam BJ; Hung SP; Baldi PF; Hertel KJ
Proc Natl Acad Sci U S A; 2005 Nov; 102(45):16176-81. PubMed ID: 16260721
[TBL] [Abstract][Full Text] [Related]
3. Splice site proximity influences alternative exon definition.
Carranza F; Shenasa H; Hertel KJ
RNA Biol; 2022 Jan; 19(1):829-840. PubMed ID: 35723015
[TBL] [Abstract][Full Text] [Related]
4. Combinatorial control of exon recognition.
Hertel KJ
J Biol Chem; 2008 Jan; 283(3):1211-5. PubMed ID: 18024426
[TBL] [Abstract][Full Text] [Related]
5. Splicing Enhancers at Intron-Exon Borders Participate in Acceptor Splice Sites Recognition.
Kováčová T; Souček P; Hujová P; Freiberger T; Grodecká L
Int J Mol Sci; 2020 Sep; 21(18):. PubMed ID: 32911621
[TBL] [Abstract][Full Text] [Related]
6. Assembly of splicing complexes on exon 11 of the human insulin receptor gene does not correlate with splicing efficiency in-vitro.
Webster NJ; Evans LG; Caples M; Erker L; Chew SL
BMC Mol Biol; 2004 Jul; 5():7. PubMed ID: 15233842
[TBL] [Abstract][Full Text] [Related]
7. Conserved RNA secondary structures promote alternative splicing.
Shepard PJ; Hertel KJ
RNA; 2008 Aug; 14(8):1463-9. PubMed ID: 18579871
[TBL] [Abstract][Full Text] [Related]
8. Impact of acceptor splice site NAGTAG motif on exon recognition.
Hujová P; Grodecká L; Souček P; Freiberger T
Mol Biol Rep; 2019 Jun; 46(3):2877-2884. PubMed ID: 30840204
[TBL] [Abstract][Full Text] [Related]
9. Regulation of constitutive and alternative mRNA splicing across the human transcriptome by PRPF8 is determined by 5' splice site strength.
Wickramasinghe VO; Gonzàlez-Porta M; Perera D; Bartolozzi AR; Sibley CR; Hallegger M; Ule J; Marioni JC; Venkitaraman AR
Genome Biol; 2015 Sep; 16(1):201. PubMed ID: 26392272
[TBL] [Abstract][Full Text] [Related]
10. Cooperation of 5' and 3' processing sites as well as intron and exon sequences in calcitonin exon recognition.
Zandberg H; Moen TC; Baas PD
Nucleic Acids Res; 1995 Jan; 23(2):248-55. PubMed ID: 7862529
[TBL] [Abstract][Full Text] [Related]
11. Changes in exon-intron structure during vertebrate evolution affect the splicing pattern of exons.
Gelfman S; Burstein D; Penn O; Savchenko A; Amit M; Schwartz S; Pupko T; Ast G
Genome Res; 2012 Jan; 22(1):35-50. PubMed ID: 21974994
[TBL] [Abstract][Full Text] [Related]
12. A systematic analysis of intronic sequences downstream of 5' splice sites reveals a widespread role for U-rich motifs and TIA1/TIAL1 proteins in alternative splicing regulation.
Aznarez I; Barash Y; Shai O; He D; Zielenski J; Tsui LC; Parkinson J; Frey BJ; Rommens JM; Blencowe BJ
Genome Res; 2008 Aug; 18(8):1247-58. PubMed ID: 18456862
[TBL] [Abstract][Full Text] [Related]
13. Human GC-AG alternative intron isoforms with weak donor sites show enhanced consensus at acceptor exon positions.
Thanaraj TA; Clark F
Nucleic Acids Res; 2001 Jun; 29(12):2581-93. PubMed ID: 11410667
[TBL] [Abstract][Full Text] [Related]
14. Compensatory relationship between splice sites and exonic splicing signals depending on the length of vertebrate introns.
Dewey CN; Rogozin IB; Koonin EV
BMC Genomics; 2006 Dec; 7():311. PubMed ID: 17156453
[TBL] [Abstract][Full Text] [Related]
15. Spliceosome assembly pathways for different types of alternative splicing converge during commitment to splice site pairing in the A complex.
Kotlajich MV; Crabb TL; Hertel KJ
Mol Cell Biol; 2009 Feb; 29(4):1072-82. PubMed ID: 19064642
[TBL] [Abstract][Full Text] [Related]
16. Global control of aberrant splice-site activation by auxiliary splicing sequences: evidence for a gradient in exon and intron definition.
Královicová J; Vorechovsky I
Nucleic Acids Res; 2007; 35(19):6399-413. PubMed ID: 17881373
[TBL] [Abstract][Full Text] [Related]
17. A DNA damage signal activates and derepresses exon inclusion in Drosophila TAF1 alternative splicing.
Marengo MS; Wassarman DA
RNA; 2008 Aug; 14(8):1681-95. PubMed ID: 18596254
[TBL] [Abstract][Full Text] [Related]
18. Activation of the intronic cryptic 5' splice site depends on its distance to the upstream cassette exon.
Liu W; Li X; Liao S; Dou K; Zhang Y
Gene; 2017 Jul; 619():30-36. PubMed ID: 28322992
[TBL] [Abstract][Full Text] [Related]
19. HnRNP L-mediated regulation of mammalian alternative splicing by interference with splice site recognition.
Heiner M; Hui J; Schreiner S; Hung LH; Bindereif A
RNA Biol; 2010; 7(1):56-64. PubMed ID: 19946215
[TBL] [Abstract][Full Text] [Related]
20. Switch in 3' splice site recognition between exon definition and splicing catalysis is important for sex-lethal autoregulation.
Penalva LO; Lallena MJ; Valcárcel J
Mol Cell Biol; 2001 Mar; 21(6):1986-96. PubMed ID: 11238934
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]