BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

121 related articles for article (PubMed ID: 21803806)

  • 1. Gee Fu: a sequence version and web-services database tool for genomic assembly, genome feature and NGS data.
    Ramirez-Gonzalez R; Caccamo M; MacLean D
    Bioinformatics; 2011 Oct; 27(19):2754-5. PubMed ID: 21803806
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The UCSC genome browser and associated tools.
    Kuhn RM; Haussler D; Kent WJ
    Brief Bioinform; 2013 Mar; 14(2):144-61. PubMed ID: 22908213
    [TBL] [Abstract][Full Text] [Related]  

  • 3. GeneCruiser: a web service for the annotation of microarray data.
    Liefeld T; Reich M; Gould J; Zhang P; Tamayo P; Mesirov JP
    Bioinformatics; 2005 Sep; 21(18):3681-2. PubMed ID: 16030072
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The Ruby UCSC API: accessing the UCSC genome database using Ruby.
    Mishima H; Aerts J; Katayama T; Bonnal RJ; Yoshiura K
    BMC Bioinformatics; 2012 Sep; 13():240. PubMed ID: 22994508
    [TBL] [Abstract][Full Text] [Related]  

  • 5. GeneTools--application for functional annotation and statistical hypothesis testing.
    Beisvag V; Jünge FK; Bergum H; Jølsum L; Lydersen S; Günther CC; Ramampiaro H; Langaas M; Sandvik AK; Laegreid A
    BMC Bioinformatics; 2006 Oct; 7():470. PubMed ID: 17062145
    [TBL] [Abstract][Full Text] [Related]  

  • 6. ESAP plus: a web-based server for EST-SSR marker development.
    Ponyared P; Ponsawat J; Tongsima S; Seresangtakul P; Akkasaeng C; Tantisuwichwong N
    BMC Genomics; 2016 Dec; 17(Suppl 13):1035. PubMed ID: 28155670
    [TBL] [Abstract][Full Text] [Related]  

  • 7. An Ergatis-based prokaryotic genome annotation web server.
    Hemmerich C; Buechlein A; Podicheti R; Revanna KV; Dong Q
    Bioinformatics; 2010 Apr; 26(8):1122-4. PubMed ID: 20194626
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genomics made easier: an introductory tutorial to genome datamining.
    Schattner P
    Genomics; 2009 Mar; 93(3):187-95. PubMed ID: 19041391
    [TBL] [Abstract][Full Text] [Related]  

  • 9. MILANO--custom annotation of microarray results using automatic literature searches.
    Rubinstein R; Simon I
    BMC Bioinformatics; 2005 Jan; 6():12. PubMed ID: 15661078
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Knowledge Base Commons (KBCommons) v1.1: a universal framework for multi-omics data integration and biological discoveries.
    Zeng S; Lyu Z; Narisetti SRK; Xu D; Joshi T
    BMC Genomics; 2019 Dec; 20(Suppl 11):947. PubMed ID: 31856718
    [TBL] [Abstract][Full Text] [Related]  

  • 11. TrawlerWeb: an online de novo motif discovery tool for next-generation sequencing datasets.
    Dang LT; Tondl M; Chiu MHH; Revote J; Paten B; Tano V; Tokolyi A; Besse F; Quaife-Ryan G; Cumming H; Drvodelic MJ; Eichenlaub MP; Hallab JC; Stolper JS; Rossello FJ; Bogoyevitch MA; Jans DA; Nim HT; Porrello ER; Hudson JE; Ramialison M
    BMC Genomics; 2018 Apr; 19(1):238. PubMed ID: 29621972
    [TBL] [Abstract][Full Text] [Related]  

  • 12. AutoGRAPH: an interactive web server for automating and visualizing comparative genome maps.
    Derrien T; André C; Galibert F; Hitte C
    Bioinformatics; 2007 Feb; 23(4):498-9. PubMed ID: 17145741
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Using the Ensembl genome server to browse genomic sequence data.
    Fernández-Suárez XM; Schuster MK
    Curr Protoc Bioinformatics; 2007 Jan; Chapter 1():Unit 1.15. PubMed ID: 18428779
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The UCSC Genome Browser Database: update 2006.
    Hinrichs AS; Karolchik D; Baertsch R; Barber GP; Bejerano G; Clawson H; Diekhans M; Furey TS; Harte RA; Hsu F; Hillman-Jackson J; Kuhn RM; Pedersen JS; Pohl A; Raney BJ; Rosenbloom KR; Siepel A; Smith KE; Sugnet CW; Sultan-Qurraie A; Thomas DJ; Trumbower H; Weber RJ; Weirauch M; Zweig AS; Haussler D; Kent WJ
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D590-8. PubMed ID: 16381938
    [TBL] [Abstract][Full Text] [Related]  

  • 15. SAMMate: a GUI tool for processing short read alignments in SAM/BAM format.
    Xu G; Deng N; Zhao Z; Judeh T; Flemington E; Zhu D
    Source Code Biol Med; 2011 Jan; 6(1):2. PubMed ID: 21232146
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The UCSC genome browser database: update 2007.
    Kuhn RM; Karolchik D; Zweig AS; Trumbower H; Thomas DJ; Thakkapallayil A; Sugnet CW; Stanke M; Smith KE; Siepel A; Rosenbloom KR; Rhead B; Raney BJ; Pohl A; Pedersen JS; Hsu F; Hinrichs AS; Harte RA; Diekhans M; Clawson H; Bejerano G; Barber GP; Baertsch R; Haussler D; Kent WJ
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D668-73. PubMed ID: 17142222
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Micro-Analyzer: automatic preprocessing of Affymetrix microarray data.
    Guzzi PH; Cannataro M
    Comput Methods Programs Biomed; 2013 Aug; 111(2):402-9. PubMed ID: 23731720
    [TBL] [Abstract][Full Text] [Related]  

  • 18. 3D-GENOMICS: a database to compare structural and functional annotations of proteins between sequenced genomes.
    Fleming K; Müller A; MacCallum RM; Sternberg MJ
    Nucleic Acids Res; 2004 Jan; 32(Database issue):D245-50. PubMed ID: 14681404
    [TBL] [Abstract][Full Text] [Related]  

  • 19. OTP: An automatized system for managing and processing NGS data.
    Reisinger E; Genthner L; Kerssemakers J; Kensche P; Borufka S; Jugold A; Kling A; Prinz M; Scholz I; Zipprich G; Eils R; Lawerenz C; Eils J
    J Biotechnol; 2017 Nov; 261():53-62. PubMed ID: 28803971
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Using GBrowse 2.0 to visualize and share next-generation sequence data.
    Stein LD
    Brief Bioinform; 2013 Mar; 14(2):162-71. PubMed ID: 23376193
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.