275 related articles for article (PubMed ID: 21803858)
1. True single-molecule DNA sequencing of a pleistocene horse bone.
Orlando L; Ginolhac A; Raghavan M; Vilstrup J; Rasmussen M; Magnussen K; Steinmann KE; Kapranov P; Thompson JF; Zazula G; Froese D; Moltke I; Shapiro B; Hofreiter M; Al-Rasheid KA; Gilbert MT; Willerslev E
Genome Res; 2011 Oct; 21(10):1705-19. PubMed ID: 21803858
[TBL] [Abstract][Full Text] [Related]
2. Improving the performance of true single molecule sequencing for ancient DNA.
Ginolhac A; Vilstrup J; Stenderup J; Rasmussen M; Stiller M; Shapiro B; Zazula G; Froese D; Steinmann KE; Thompson JF; Al-Rasheid KA; Gilbert TM; Willerslev E; Orlando L
BMC Genomics; 2012 May; 13():177. PubMed ID: 22574620
[TBL] [Abstract][Full Text] [Related]
3. Improving ancient DNA read mapping against modern reference genomes.
Schubert M; Ginolhac A; Lindgreen S; Thompson JF; Al-Rasheid KA; Willerslev E; Krogh A; Orlando L
BMC Genomics; 2012 May; 13():178. PubMed ID: 22574660
[TBL] [Abstract][Full Text] [Related]
4. Ligation bias in illumina next-generation DNA libraries: implications for sequencing ancient genomes.
Seguin-Orlando A; Schubert M; Clary J; Stagegaard J; Alberdi MT; Prado JL; Prieto A; Willerslev E; Orlando L
PLoS One; 2013; 8(10):e78575. PubMed ID: 24205269
[TBL] [Abstract][Full Text] [Related]
5. Surveying the repair of ancient DNA from bones via high-throughput sequencing.
Mouttham N; Klunk J; Kuch M; Fourney R; Poinar H
Biotechniques; 2015 Jul; 59(1):19-25. PubMed ID: 26156780
[TBL] [Abstract][Full Text] [Related]
6. Sequencing Library Preparation from Degraded Samples for Non-illumina Sequencing Platforms.
Martins RF; Kampmann ML; Förster DW
Methods Mol Biol; 2019; 1963():85-92. PubMed ID: 30875047
[TBL] [Abstract][Full Text] [Related]
7. Shotgun microbial profiling of fossil remains.
Der Sarkissian C; Ermini L; Jónsson H; Alekseev AN; Crubezy E; Shapiro B; Orlando L
Mol Ecol; 2014 Apr; 23(7):1780-98. PubMed ID: 24612293
[TBL] [Abstract][Full Text] [Related]
8. Roche genome sequencer FLX based high-throughput sequencing of ancient DNA.
Alquezar-Planas DE; Fordyce SL
Methods Mol Biol; 2012; 888():109-18. PubMed ID: 22665278
[TBL] [Abstract][Full Text] [Related]
9. Combining bleach and mild predigestion improves ancient DNA recovery from bones.
Boessenkool S; Hanghøj K; Nistelberger HM; Der Sarkissian C; Gondek AT; Orlando L; Barrett JH; Star B
Mol Ecol Resour; 2017 Jul; 17(4):742-751. PubMed ID: 27790833
[TBL] [Abstract][Full Text] [Related]
10. Testing a series of modifications on genomic library preparation methods for ancient or degraded DNA.
Psonis N; Vassou D; Kafetzopoulos D
Anal Biochem; 2021 Jun; 623():114193. PubMed ID: 33831350
[TBL] [Abstract][Full Text] [Related]
11. Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing.
Mak SST; Gopalakrishnan S; Carøe C; Geng C; Liu S; Sinding MS; Kuderna LFK; Zhang W; Fu S; Vieira FG; Germonpré M; Bocherens H; Fedorov S; Petersen B; Sicheritz-Pontén T; Marques-Bonet T; Zhang G; Jiang H; Gilbert MTP
Gigascience; 2017 Aug; 6(8):1-13. PubMed ID: 28854615
[TBL] [Abstract][Full Text] [Related]
12. mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters.
Jónsson H; Ginolhac A; Schubert M; Johnson PL; Orlando L
Bioinformatics; 2013 Jul; 29(13):1682-4. PubMed ID: 23613487
[TBL] [Abstract][Full Text] [Related]
13. Double-Stranded Library Preparation for Ancient and Other Degraded Samples.
Henneberger K; Barlow A; Paijmans JLA
Methods Mol Biol; 2019; 1963():65-73. PubMed ID: 30875045
[TBL] [Abstract][Full Text] [Related]
14. Assessing the impact of USER-treatment on hyRAD capture applied to ancient DNA.
Suchan T; Chauvey L; Poullet M; Tonasso-Calvière L; Schiavinato S; Clavel P; Clavel B; Lepetz S; Seguin-Orlando A; Orlando L
Mol Ecol Resour; 2022 Aug; 22(6):2262-2274. PubMed ID: 35398984
[TBL] [Abstract][Full Text] [Related]
15. A novel ultra high-throughput 16S rRNA gene amplicon sequencing library preparation method for the Illumina HiSeq platform.
de Muinck EJ; Trosvik P; Gilfillan GD; Hov JR; Sundaram AYM
Microbiome; 2017 Jul; 5(1):68. PubMed ID: 28683838
[TBL] [Abstract][Full Text] [Related]
16. Pulling out the 1%: whole-genome capture for the targeted enrichment of ancient DNA sequencing libraries.
Carpenter ML; Buenrostro JD; Valdiosera C; Schroeder H; Allentoft ME; Sikora M; Rasmussen M; Gravel S; Guillén S; Nekhrizov G; Leshtakov K; Dimitrova D; Theodossiev N; Pettener D; Luiselli D; Sandoval K; Moreno-Estrada A; Li Y; Wang J; Gilbert MT; Willerslev E; Greenleaf WJ; Bustamante CD
Am J Hum Genet; 2013 Nov; 93(5):852-64. PubMed ID: 24568772
[TBL] [Abstract][Full Text] [Related]
17. Comparing the performance of three ancient DNA extraction methods for high-throughput sequencing.
Gamba C; Hanghøj K; Gaunitz C; Alfarhan AH; Alquraishi SA; Al-Rasheid KA; Bradley DG; Orlando L
Mol Ecol Resour; 2016 Mar; 16(2):459-69. PubMed ID: 26401836
[TBL] [Abstract][Full Text] [Related]
18. Analysis of high-throughput ancient DNA sequencing data.
Kircher M
Methods Mol Biol; 2012; 840():197-228. PubMed ID: 22237537
[TBL] [Abstract][Full Text] [Related]
19. Library construction for ancient genomics: single strand or double strand?
Bennett EA; Massilani D; Lizzo G; Daligault J; Geigl EM; Grange T
Biotechniques; 2014 Jun; 56(6):289-90, 292-6, 298, passim. PubMed ID: 24924389
[TBL] [Abstract][Full Text] [Related]
20. Road blocks on paleogenomes--polymerase extension profiling reveals the frequency of blocking lesions in ancient DNA.
Heyn P; Stenzel U; Briggs AW; Kircher M; Hofreiter M; Meyer M
Nucleic Acids Res; 2010 Sep; 38(16):e161. PubMed ID: 20587499
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
