These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

148 related articles for article (PubMed ID: 21807453)

  • 1. Ligand-induced conformational change of a protein reproduced by a linear combination of displacement vectors obtained from normal mode analysis.
    Wako H; Endo S
    Biophys Chem; 2011 Dec; 159(2-3):257-66. PubMed ID: 21807453
    [TBL] [Abstract][Full Text] [Related]  

  • 2. On the applicability of elastic network normal modes in small-molecule docking.
    Dietzen M; Zotenko E; Hildebrandt A; Lengauer T
    J Chem Inf Model; 2012 Mar; 52(3):844-56. PubMed ID: 22320151
    [TBL] [Abstract][Full Text] [Related]  

  • 3. How different are structurally flexible and rigid binding sites? Sequence and structural features discriminating proteins that do and do not undergo conformational change upon ligand binding.
    Gunasekaran K; Nussinov R
    J Mol Biol; 2007 Jan; 365(1):257-73. PubMed ID: 17059826
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Effects of ligand binding on the association properties and conformation in solution of retinoic acid receptors RXR and RAR.
    Egea PF; Rochel N; Birck C; Vachette P; Timmins PA; Moras D
    J Mol Biol; 2001 Mar; 307(2):557-76. PubMed ID: 11254382
    [TBL] [Abstract][Full Text] [Related]  

  • 5. What is the relationship between the global structures of apo and holo proteins?
    Brylinski M; Skolnick J
    Proteins; 2008 Feb; 70(2):363-77. PubMed ID: 17680687
    [TBL] [Abstract][Full Text] [Related]  

  • 6. FDS: flexible ligand and receptor docking with a continuum solvent model and soft-core energy function.
    Taylor RD; Jewsbury PJ; Essex JW
    J Comput Chem; 2003 Oct; 24(13):1637-56. PubMed ID: 12926007
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Normal modes of vibration in bovine pancreatic trypsin inhibitor and its mechanical property.
    Nishikawa T; Go N
    Proteins; 1987; 2(4):308-29. PubMed ID: 3448606
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Conformational and dynamics changes induced by bile acids binding to chicken liver bile acid binding protein.
    Eberini I; Guerini Rocco A; Ientile AR; Baptista AM; Gianazza E; Tomaselli S; Molinari H; Ragona L
    Proteins; 2008 Jun; 71(4):1889-98. PubMed ID: 18175325
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Protein-ligand docking using mutually orthogonal Latin squares (MOLSDOCK).
    Viji SN; Prasad PA; Gautham N
    J Chem Inf Model; 2009 Dec; 49(12):2687-94. PubMed ID: 19968302
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Energy minimization in low-frequency normal modes to efficiently allow for global flexibility during systematic protein-protein docking.
    May A; Zacharias M
    Proteins; 2008 Feb; 70(3):794-809. PubMed ID: 17729269
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Conformational selection in silico: loop latching motions and ligand binding in enzymes.
    Wong S; Jacobson MP
    Proteins; 2008 Apr; 71(1):153-64. PubMed ID: 17932934
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Ligand-induced conformational change in transferrins: crystal structure of the open form of the N-terminal half-molecule of human transferrin.
    Jeffrey PD; Bewley MC; MacGillivray RT; Mason AB; Woodworth RC; Baker EN
    Biochemistry; 1998 Oct; 37(40):13978-86. PubMed ID: 9760232
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Interactions in native binding sites cause a large change in protein dynamics.
    Ming D; Wall ME
    J Mol Biol; 2006 Apr; 358(1):213-23. PubMed ID: 16513135
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Linear response theory in dihedral angle space for protein structural change upon ligand binding.
    Omori S; Fuchigami S; Ikeguchi M; Kidera A
    J Comput Chem; 2009 Dec; 30(16):2602-8. PubMed ID: 19373827
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Free-energy landscapes of protein domain movements upon ligand binding.
    Kondo HX; Okimoto N; Morimoto G; Taiji M
    J Phys Chem B; 2011 Jun; 115(23):7629-36. PubMed ID: 21608983
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Apo adenylate kinase encodes its holo form: a principal component and varimax analysis.
    Cukier RI
    J Phys Chem B; 2009 Feb; 113(6):1662-72. PubMed ID: 19159290
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Accounting for loop flexibility during protein-protein docking.
    Bastard K; Prévost C; Zacharias M
    Proteins; 2006 Mar; 62(4):956-69. PubMed ID: 16372349
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Effects of Zn(II) binding and apoprotein structural stability on the conformation change of designed antennafinger proteins.
    Hori Y; Sugiura Y
    Biochemistry; 2004 Mar; 43(11):3068-74. PubMed ID: 15023058
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Analysis of the structure of human apo-S100B at low temperature indicates a unimodal conformational distribution is adopted by calcium-free S100 proteins.
    Malik S; Revington M; Smith SP; Shaw GS
    Proteins; 2008 Oct; 73(1):28-42. PubMed ID: 18384084
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Ligand-induced conformational changes in ras p21: a normal mode and energy minimization analysis.
    Ma J; Karplus M
    J Mol Biol; 1997 Nov; 274(1):114-31. PubMed ID: 9398520
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.