136 related articles for article (PubMed ID: 21814388)
1. 3-base periodicity in coding DNA is affected by intercodon dinucleotides.
Sánchez J
Bioinformation; 2011; 6(9):327-9. PubMed ID: 21814388
[TBL] [Abstract][Full Text] [Related]
2. Intercodon dinucleotides affect codon choice in plant genes.
De Amicis F; Marchetti S
Nucleic Acids Res; 2000 Sep; 28(17):3339-45. PubMed ID: 10954603
[TBL] [Abstract][Full Text] [Related]
3. Sequences encoding identical peptides for the analysis and manipulation of coding DNA.
Sánchez J
Bioinformation; 2013; 9(10):511-7. PubMed ID: 23861567
[TBL] [Abstract][Full Text] [Related]
4. A simple model to explain three-base periodicity in coding DNA.
Sánchez J; López-Villaseñor I
FEBS Lett; 2006 Nov; 580(27):6413-22. PubMed ID: 17097640
[TBL] [Abstract][Full Text] [Related]
5. Codon usage analysis of Ascaris species influence of base and intercodon frequencies on the synonymous codon usage.
Fadiel AA; Lithwick S; Gamra MM
J Egypt Soc Parasitol; 2002 Aug; 32(2):625-38. PubMed ID: 12214939
[TBL] [Abstract][Full Text] [Related]
6. Three-base periodicity patterns and self-similarity in whole bacterial chromosomes.
López-Villaseñor I; José MV; Sánchez J
Biochem Biophys Res Commun; 2004 Dec; 325(2):467-78. PubMed ID: 15530416
[TBL] [Abstract][Full Text] [Related]
7. Codon usage in Homo sapiens: evidence for a coding pattern on the non-coding strand and evolutionary implications of dinucleotide discrimination.
Alff-Steinberger C
J Theor Biol; 1987 Jan; 124(1):89-95. PubMed ID: 3657190
[TBL] [Abstract][Full Text] [Related]
8. The use of logistic models for the analysis of codon frequencies of DNA sequences in terms of explanatory variables.
Amfoh KK; Shaw RF; Bonney GE
Biometrics; 1994 Dec; 50(4):1054-63. PubMed ID: 7786987
[TBL] [Abstract][Full Text] [Related]
9. On origin of genetic code and tRNA before translation.
Rodin AS; Szathmáry E; Rodin SN
Biol Direct; 2011 Feb; 6():14. PubMed ID: 21342520
[TBL] [Abstract][Full Text] [Related]
10. Patterns of nucleotides that flank substitutions in human orthologous genes.
Ma L; Zhang T; Huang Z; Jiang X; Tao S
BMC Genomics; 2010 Jul; 11():416. PubMed ID: 20602772
[TBL] [Abstract][Full Text] [Related]
11. Influence of intercodon and base frequencies on codon usage in filarial parasites.
Fadiel A; Lithwick S; Wanas MQ; Cuticchia AJ
Genomics; 2001 Jun; 74(2):197-210. PubMed ID: 11386756
[TBL] [Abstract][Full Text] [Related]
12. Identification of a circular code periodicity in the bacterial ribosome: origin of codon periodicity in genes?
Michel CJ; Thompson JD
RNA Biol; 2020 Apr; 17(4):571-583. PubMed ID: 31960748
[TBL] [Abstract][Full Text] [Related]
13. On fuzzy semantic similarity measure for DNA coding.
Ahmad M; Jung LT; Bhuiyan MA
Comput Biol Med; 2016 Feb; 69():144-51. PubMed ID: 26773936
[TBL] [Abstract][Full Text] [Related]
14. Periodicity of DNA in exons.
Eskesen ST; Eskesen FN; Kinghorn B; Ruvinsky A
BMC Mol Biol; 2004 Aug; 5():12. PubMed ID: 15315715
[TBL] [Abstract][Full Text] [Related]
15. "Cryptic" repeating triplets of purines and pyrimidines (cRRY(i)) are frequent and polymorphic: analysis of coding cRRY(i) in the proopiomelanocortin (POMC) and TATA-binding protein (TBP) genes.
Gostout B; Liu Q; Sommer SS
Am J Hum Genet; 1993 Jun; 52(6):1182-90. PubMed ID: 8503450
[TBL] [Abstract][Full Text] [Related]
16. Periodicities of dinucleotide self-information values in phi X174 DNA.
Furlong NB; Beckner CF
Z Naturforsch C Biosci; 1982; 37(3-4):321-5. PubMed ID: 6461977
[TBL] [Abstract][Full Text] [Related]
17. Specific selection pressure at the third codon positions: contribution to 10- to 11-base periodicity in prokaryotic genomes.
Cohanim AB; Trifonov EN; Kashi Y
J Mol Evol; 2006 Sep; 63(3):393-400. PubMed ID: 16897261
[TBL] [Abstract][Full Text] [Related]
18. Discrepancy among the synonymous codons with respect to their selection as optimal codon in bacteria.
Satapathy SS; Powdel BR; Buragohain AK; Ray SK
DNA Res; 2016 Oct; 23(5):441-449. PubMed ID: 27426467
[TBL] [Abstract][Full Text] [Related]
19. The 3-base periodicity and codon usage of coding sequences are correlated with gene expression at the level of transcription elongation.
Trotta E
PLoS One; 2011; 6(6):e21590. PubMed ID: 21738721
[TBL] [Abstract][Full Text] [Related]
20. Analysis of bilateral inverse symmetry in whole bacterial chromosomes.
Sánchez J; José MV
Biochem Biophys Res Commun; 2002 Nov; 299(1):126-34. PubMed ID: 12435398
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]