191 related articles for article (PubMed ID: 21887323)
1. Divalent metal ion differentially regulates the sequential nicking reactions of the GIY-YIG homing endonuclease I-BmoI.
Kleinstiver BP; Bérubé-Janzen W; Fernandes AD; Edgell DR
PLoS One; 2011; 6(8):e23804. PubMed ID: 21887323
[TBL] [Abstract][Full Text] [Related]
2. Strand-specific contacts and divalent metal ion regulate double-strand break formation by the GIY-YIG homing endonuclease I-BmoI.
Carter JM; Friedrich NC; Kleinstiver B; Edgell DR
J Mol Biol; 2007 Nov; 374(2):306-21. PubMed ID: 17936302
[TBL] [Abstract][Full Text] [Related]
3. The monomeric GIY-YIG homing endonuclease I-BmoI uses a molecular anchor and a flexible tether to sequentially nick DNA.
Kleinstiver BP; Wolfs JM; Edgell DR
Nucleic Acids Res; 2013 May; 41(10):5413-27. PubMed ID: 23558745
[TBL] [Abstract][Full Text] [Related]
4. Distance determination by GIY-YIG intron endonucleases: discrimination between repression and cleavage functions.
Liu Q; Derbyshire V; Belfort M; Edgell DR
Nucleic Acids Res; 2006; 34(6):1755-64. PubMed ID: 16582101
[TBL] [Abstract][Full Text] [Related]
5. Tetrameric restriction enzymes: expansion to the GIY-YIG nuclease family.
Gasiunas G; Sasnauskas G; Tamulaitis G; Urbanke C; Razaniene D; Siksnys V
Nucleic Acids Res; 2008 Feb; 36(3):938-49. PubMed ID: 18086711
[TBL] [Abstract][Full Text] [Related]
6. Catalytic domain structure and hypothesis for function of GIY-YIG intron endonuclease I-TevI.
Van Roey P; Meehan L; Kowalski JC; Belfort M; Derbyshire V
Nat Struct Biol; 2002 Nov; 9(11):806-11. PubMed ID: 12379841
[TBL] [Abstract][Full Text] [Related]
7. A unified genetic, computational and experimental framework identifies functionally relevant residues of the homing endonuclease I-BmoI.
Kleinstiver BP; Fernandes AD; Gloor GB; Edgell DR
Nucleic Acids Res; 2010 Apr; 38(7):2411-27. PubMed ID: 20061372
[TBL] [Abstract][Full Text] [Related]
8. Coincidence of cleavage sites of intron endonuclease I-TevI and critical sequences of the host thymidylate synthase gene.
Edgell DR; Stanger MJ; Belfort M
J Mol Biol; 2004 Nov; 343(5):1231-41. PubMed ID: 15491609
[TBL] [Abstract][Full Text] [Related]
9. Structure of bacteriophage T4 endonuclease II mutant E118A, a tetrameric GIY-YIG enzyme.
Andersson CE; Lagerbäck P; Carlson K
J Mol Biol; 2010 Apr; 397(4):1003-16. PubMed ID: 20156453
[TBL] [Abstract][Full Text] [Related]
10. Biochemical and mutagenic analysis of I-CreII reveals distinct but important roles for both the H-N-H and GIY-YIG motifs.
Corina LE; Qiu W; Desai A; Herrin DL
Nucleic Acids Res; 2009 Sep; 37(17):5810-21. PubMed ID: 19651876
[TBL] [Abstract][Full Text] [Related]
11. Related homing endonucleases I-BmoI and I-TevI use different strategies to cleave homologous recognition sites.
Edgell DR; Shub DA
Proc Natl Acad Sci U S A; 2001 Jul; 98(14):7898-903. PubMed ID: 11416170
[TBL] [Abstract][Full Text] [Related]
12. Perpetuating the homing endonuclease life cycle: identification of mutations that modulate and change I-TevI cleavage preference.
Roy AC; Wilson GG; Edgell DR
Nucleic Acids Res; 2016 Sep; 44(15):7350-9. PubMed ID: 27387281
[TBL] [Abstract][Full Text] [Related]
13. Oligomeric structure diversity within the GIY-YIG nuclease family.
Ibryashkina EM; Sasnauskas G; Solonin AS; Zakharova MV; Siksnys V
J Mol Biol; 2009 Mar; 387(1):10-6. PubMed ID: 19361436
[TBL] [Abstract][Full Text] [Related]
14. Monomeric site-specific nucleases for genome editing.
Kleinstiver BP; Wolfs JM; Kolaczyk T; Roberts AK; Hu SX; Edgell DR
Proc Natl Acad Sci U S A; 2012 May; 109(21):8061-6. PubMed ID: 22566637
[TBL] [Abstract][Full Text] [Related]
15. Importance of a single base pair for discrimination between intron-containing and intronless alleles by endonuclease I-BmoI.
Edgell DR; Stanger MJ; Belfort M
Curr Biol; 2003 May; 13(11):973-8. PubMed ID: 12781137
[TBL] [Abstract][Full Text] [Related]
16. Hpy188I-DNA pre- and post-cleavage complexes--snapshots of the GIY-YIG nuclease mediated catalysis.
Sokolowska M; Czapinska H; Bochtler M
Nucleic Acids Res; 2011 Mar; 39(4):1554-64. PubMed ID: 20935048
[TBL] [Abstract][Full Text] [Related]
17. Engineering variants of the I-SceI homing endonuclease with strand-specific and site-specific DNA-nicking activity.
Niu Y; Tenney K; Li H; Gimble FS
J Mol Biol; 2008 Sep; 382(1):188-202. PubMed ID: 18644379
[TBL] [Abstract][Full Text] [Related]
18. Configuration of the catalytic GIY-YIG domain of intron endonuclease I-TevI: coincidence of computational and molecular findings.
Kowalski JC; Belfort M; Stapleton MA; Holpert M; Dansereau JT; Pietrokovski S; Baxter SM; Derbyshire V
Nucleic Acids Res; 1999 May; 27(10):2115-25. PubMed ID: 10219084
[TBL] [Abstract][Full Text] [Related]
19. Amino acid residues in the GIY-YIG endonuclease II of phage T4 affecting sequence recognition and binding as well as catalysis.
Lagerbäck P; Carlson K
J Bacteriol; 2008 Aug; 190(16):5533-44. PubMed ID: 18539732
[TBL] [Abstract][Full Text] [Related]
20. Type II restriction endonuclease R.Eco29kI is a member of the GIY-YIG nuclease superfamily.
Ibryashkina EM; Zakharova MV; Baskunov VB; Bogdanova ES; Nagornykh MO; Den'mukhamedov MM; Melnik BS; Kolinski A; Gront D; Feder M; Solonin AS; Bujnicki JM
BMC Struct Biol; 2007 Jul; 7():48. PubMed ID: 17626614
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]