BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

344 related articles for article (PubMed ID: 21893519)

  • 1. Integrated pathway-level analysis of transcriptomics and metabolomics data with IMPaLA.
    Kamburov A; Cavill R; Ebbels TM; Herwig R; Keun HC
    Bioinformatics; 2011 Oct; 27(20):2917-8. PubMed ID: 21893519
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Paintomics: a web based tool for the joint visualization of transcriptomics and metabolomics data.
    García-Alcalde F; García-López F; Dopazo J; Conesa A
    Bioinformatics; 2011 Jan; 27(1):137-9. PubMed ID: 21098431
    [TBL] [Abstract][Full Text] [Related]  

  • 3. 3Omics: a web-based systems biology tool for analysis, integration and visualization of human transcriptomic, proteomic and metabolomic data.
    Kuo TC; Tian TF; Tseng YJ
    BMC Syst Biol; 2013 Jul; 7():64. PubMed ID: 23875761
    [TBL] [Abstract][Full Text] [Related]  

  • 4. PRIMe: a Web site that assembles tools for metabolomics and transcriptomics.
    Akiyama K; Chikayama E; Yuasa H; Shimada Y; Tohge T; Shinozaki K; Hirai MY; Sakurai T; Kikuchi J; Saito K
    In Silico Biol; 2008; 8(3-4):339-45. PubMed ID: 19032166
    [TBL] [Abstract][Full Text] [Related]  

  • 5. TICL--a web tool for network-based interpretation of compound lists inferred by high-throughput metabolomics.
    Antonov AV; Dietmann S; Wong P; Mewes HW
    FEBS J; 2009 Apr; 276(7):2084-94. PubMed ID: 19292876
    [TBL] [Abstract][Full Text] [Related]  

  • 6. RepExplore: addressing technical replicate variance in proteomics and metabolomics data analysis.
    Glaab E; Schneider R
    Bioinformatics; 2015 Jul; 31(13):2235-7. PubMed ID: 25717197
    [TBL] [Abstract][Full Text] [Related]  

  • 7. SUMMER, a shiny utility for metabolomics and multiomics exploratory research.
    Huang L; Currais A; Shokhirev MN
    Metabolomics; 2020 Dec; 16(12):126. PubMed ID: 33294943
    [TBL] [Abstract][Full Text] [Related]  

  • 8. FunRich: An open access standalone functional enrichment and interaction network analysis tool.
    Pathan M; Keerthikumar S; Ang CS; Gangoda L; Quek CY; Williamson NA; Mouradov D; Sieber OM; Simpson RJ; Salim A; Bacic A; Hill AF; Stroud DA; Ryan MT; Agbinya JI; Mariadason JM; Burgess AW; Mathivanan S
    Proteomics; 2015 Aug; 15(15):2597-601. PubMed ID: 25921073
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Functional Analysis of Metabolomics Data.
    Chagoyen M; López-Ibáñez J; Pazos F
    Methods Mol Biol; 2016; 1415():399-406. PubMed ID: 27115644
    [TBL] [Abstract][Full Text] [Related]  

  • 10. MeltDB: a software platform for the analysis and integration of metabolomics experiment data.
    Neuweger H; Albaum SP; Dondrup M; Persicke M; Watt T; Niehaus K; Stoye J; Goesmann A
    Bioinformatics; 2008 Dec; 24(23):2726-32. PubMed ID: 18765459
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A high-throughput processing service for retention time alignment of complex proteomics and metabolomics LC-MS data.
    Ahmad I; Suits F; Hoekman B; Swertz MA; Byelas H; Dijkstra M; Hooft R; Katsubo D; van Breukelen B; Bischoff R; Horvatovich P
    Bioinformatics; 2011 Apr; 27(8):1176-8. PubMed ID: 21349866
    [TBL] [Abstract][Full Text] [Related]  

  • 12. iPEAP: integrating multiple omics and genetic data for pathway enrichment analysis.
    Sun H; Wang H; Zhu R; Tang K; Gong Q; Cui J; Cao Z; Liu Q
    Bioinformatics; 2014 Mar; 30(5):737-9. PubMed ID: 24092766
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Pathway Activity Profiling (PAPi): from the metabolite profile to the metabolic pathway activity.
    Aggio RB; Ruggiero K; Villas-Bôas SG
    Bioinformatics; 2010 Dec; 26(23):2969-76. PubMed ID: 20929912
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Exon Array Analyzer: a web interface for Affymetrix exon array analysis.
    Gellert P; Uchida S; Braun T
    Bioinformatics; 2009 Dec; 25(24):3323-4. PubMed ID: 19808879
    [TBL] [Abstract][Full Text] [Related]  

  • 15. MetPA: a web-based metabolomics tool for pathway analysis and visualization.
    Xia J; Wishart DS
    Bioinformatics; 2010 Sep; 26(18):2342-4. PubMed ID: 20628077
    [TBL] [Abstract][Full Text] [Related]  

  • 16. NMRPro: an integrated web component for interactive processing and visualization of NMR spectra.
    Mohamed A; Nguyen CH; Mamitsuka H
    Bioinformatics; 2016 Jul; 32(13):2067-8. PubMed ID: 27153725
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Using MetaboAnalyst 4.0 for Comprehensive and Integrative Metabolomics Data Analysis.
    Chong J; Wishart DS; Xia J
    Curr Protoc Bioinformatics; 2019 Dec; 68(1):e86. PubMed ID: 31756036
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Integrated enrichment analysis and pathway-centered visualization of metabolomics, proteomics, transcriptomics, and genomics data by using the InCroMAP software.
    Eichner J; Rosenbaum L; Wrzodek C; Häring HU; Zell A; Lehmann R
    J Chromatogr B Analyt Technol Biomed Life Sci; 2014 Sep; 966():77-82. PubMed ID: 24811976
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Online tools for bioinformatics analyses in nutrition sciences.
    Malkaram SA; Hassan YI; Zempleni J
    Adv Nutr; 2012 Sep; 3(5):654-65. PubMed ID: 22983844
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Qupe--a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments.
    Albaum SP; Neuweger H; Fränzel B; Lange S; Mertens D; Trötschel C; Wolters D; Kalinowski J; Nattkemper TW; Goesmann A
    Bioinformatics; 2009 Dec; 25(23):3128-34. PubMed ID: 19808875
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 18.