156 related articles for article (PubMed ID: 21906294)
1. diArk 2.0 provides detailed analyses of the ever increasing eukaryotic genome sequencing data.
Hammesfahr B; Odronitz F; Hellkamp M; Kollmar M
BMC Res Notes; 2011 Sep; 4():338. PubMed ID: 21906294
[TBL] [Abstract][Full Text] [Related]
2. diArk--the database for eukaryotic genome and transcriptome assemblies in 2014.
Kollmar M; Kollmar L; Hammesfahr B; Simm D
Nucleic Acids Res; 2015 Jan; 43(Database issue):D1107-12. PubMed ID: 25378341
[TBL] [Abstract][Full Text] [Related]
3. diArk--a resource for eukaryotic genome research.
Odronitz F; Hellkamp M; Kollmar M
BMC Genomics; 2007 Apr; 8():103. PubMed ID: 17439643
[TBL] [Abstract][Full Text] [Related]
4. Identifying Sequenced Eukaryotic Genomes and Transcriptomes with diArk.
Kollmar M; Simm D
Methods Mol Biol; 2018; 1757():1-19. PubMed ID: 29761453
[TBL] [Abstract][Full Text] [Related]
5. SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology.
Mariano DC; Pereira FL; Aguiar EL; Oliveira LC; Benevides L; Guimarães LC; Folador EL; Sousa TJ; Ghosh P; Barh D; Figueiredo HC; Silva A; Ramos RT; Azevedo VA
BMC Bioinformatics; 2016 Dec; 17(Suppl 18):456. PubMed ID: 28105921
[TBL] [Abstract][Full Text] [Related]
6. Assessing the benefits of using mate-pairs to resolve repeats in de novo short-read prokaryotic assemblies.
Wetzel J; Kingsford C; Pop M
BMC Bioinformatics; 2011 Apr; 12():95. PubMed ID: 21486487
[TBL] [Abstract][Full Text] [Related]
7. Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas.
Crider K; Williams J; Qi YP; Gutman J; Yeung L; Mai C; Finkelstain J; Mehta S; Pons-Duran C; Menéndez C; Moraleda C; Rogers L; Daniels K; Green P
Cochrane Database Syst Rev; 2022 Feb; 2(2022):. PubMed ID: 36321557
[TBL] [Abstract][Full Text] [Related]
8. Comparison of ONT and CCS sequencing technologies on the polyploid genome of a medicinal plant showed that high error rate of ONT reads are not suitable for self-correction.
Zeng P; Tian Z; Han Y; Zhang W; Zhou T; Peng Y; Hu H; Cai J
Chin Med; 2022 Aug; 17(1):94. PubMed ID: 35945546
[TBL] [Abstract][Full Text] [Related]
9. The Most Frequently Used Sequencing Technologies and Assembly Methods in Different Time Segments of the Bacterial Surveillance and RefSeq Genome Databases.
Segerman B
Front Cell Infect Microbiol; 2020; 10():527102. PubMed ID: 33194784
[TBL] [Abstract][Full Text] [Related]
10. Fragmentation and Coverage Variation in Viral Metagenome Assemblies, and Their Effect in Diversity Calculations.
García-López R; Vázquez-Castellanos JF; Moya A
Front Bioeng Biotechnol; 2015; 3():141. PubMed ID: 26442255
[TBL] [Abstract][Full Text] [Related]
11. MarkerScan: Separation and assembly of cobionts sequenced alongside target species in biodiversity genomics projects.
Vancaester E; Blaxter ML
Wellcome Open Res; 2024; 9():33. PubMed ID: 38617467
[TBL] [Abstract][Full Text] [Related]
12. Integrative Meta-Assembly Pipeline (IMAP): Chromosome-level genome assembler combining multiple de novo assemblies.
Song G; Lee J; Kim J; Kang S; Lee H; Kwon D; Lee D; Lang GI; Cherry JM; Kim J
PLoS One; 2019; 14(8):e0221858. PubMed ID: 31454399
[TBL] [Abstract][Full Text] [Related]
13. Single-Molecule Real-Time Sequencing Combined with Optical Mapping Yields Completely Finished Fungal Genome.
Faino L; Seidl MF; Datema E; van den Berg GC; Janssen A; Wittenberg AH; Thomma BP
mBio; 2015 Aug; 6(4):. PubMed ID: 26286689
[TBL] [Abstract][Full Text] [Related]
14. Software for pre-processing Illumina next-generation sequencing short read sequences.
Chen C; Khaleel SS; Huang H; Wu CH
Source Code Biol Med; 2014; 9():8. PubMed ID: 24955109
[TBL] [Abstract][Full Text] [Related]
15. Reference-guided de novo assembly approach improves genome reconstruction for related species.
Lischer HEL; Shimizu KK
BMC Bioinformatics; 2017 Nov; 18(1):474. PubMed ID: 29126390
[TBL] [Abstract][Full Text] [Related]
16. Shotgun metagenomics of soil invertebrate communities reflects taxonomy, biomass, and reference genome properties.
Schmidt A; Schneider C; Decker P; Hohberg K; Römbke J; Lehmitz R; Bálint M
Ecol Evol; 2022 Jul; 12(6):e8991. PubMed ID: 35784064
[TBL] [Abstract][Full Text] [Related]
17. Optimized Illumina PCR-free library preparation for bacterial whole genome sequencing and analysis of factors influencing de novo assembly.
Huptas C; Scherer S; Wenning M
BMC Res Notes; 2016 May; 9():269. PubMed ID: 27176120
[TBL] [Abstract][Full Text] [Related]
18. Gee Fu: a sequence version and web-services database tool for genomic assembly, genome feature and NGS data.
Ramirez-Gonzalez R; Caccamo M; MacLean D
Bioinformatics; 2011 Oct; 27(19):2754-5. PubMed ID: 21803806
[TBL] [Abstract][Full Text] [Related]
19. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
Zhang DL; Ji L; Li YD
Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601
[TBL] [Abstract][Full Text] [Related]
20.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
[Next] [New Search]
