214 related articles for article (PubMed ID: 21908395)
1. mRNA pseudoknot structures can act as ribosomal roadblocks.
Tholstrup J; Oddershede LB; Sørensen MA
Nucleic Acids Res; 2012 Jan; 40(1):303-13. PubMed ID: 21908395
[TBL] [Abstract][Full Text] [Related]
2. Correlation between mechanical strength of messenger RNA pseudoknots and ribosomal frameshifting.
Hansen TM; Reihani SN; Oddershede LB; Sørensen MA
Proc Natl Acad Sci U S A; 2007 Apr; 104(14):5830-5. PubMed ID: 17389398
[TBL] [Abstract][Full Text] [Related]
3. Torsional restraint: a new twist on frameshifting pseudoknots.
Plant EP; Dinman JD
Nucleic Acids Res; 2005; 33(6):1825-33. PubMed ID: 15800212
[TBL] [Abstract][Full Text] [Related]
4. Triplex structures in an RNA pseudoknot enhance mechanical stability and increase efficiency of -1 ribosomal frameshifting.
Chen G; Chang KY; Chou MY; Bustamante C; Tinoco I
Proc Natl Acad Sci U S A; 2009 Aug; 106(31):12706-11. PubMed ID: 19628688
[TBL] [Abstract][Full Text] [Related]
5. Ribosomal pausing at a frameshifter RNA pseudoknot is sensitive to reading phase but shows little correlation with frameshift efficiency.
Kontos H; Napthine S; Brierley I
Mol Cell Biol; 2001 Dec; 21(24):8657-70. PubMed ID: 11713298
[TBL] [Abstract][Full Text] [Related]
6. A mechanical explanation of RNA pseudoknot function in programmed ribosomal frameshifting.
Namy O; Moran SJ; Stuart DI; Gilbert RJ; Brierley I
Nature; 2006 May; 441(7090):244-7. PubMed ID: 16688178
[TBL] [Abstract][Full Text] [Related]
7. Possible involvement of coaxially stacked double pseudoknots in the regulation of -1 programmed ribosomal frameshifting in RNA viruses.
Wang G; Yang Y; Huang X; Du Z
J Biomol Struct Dyn; 2015; 33(7):1547-57. PubMed ID: 25204560
[TBL] [Abstract][Full Text] [Related]
8. Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting.
Giedroc DP; Theimer CA; Nixon PL
J Mol Biol; 2000 Apr; 298(2):167-85. PubMed ID: 10764589
[TBL] [Abstract][Full Text] [Related]
9. Structural and functional studies of retroviral RNA pseudoknots involved in ribosomal frameshifting: nucleotides at the junction of the two stems are important for efficient ribosomal frameshifting.
Chen X; Chamorro M; Lee SI; Shen LX; Hines JV; Tinoco I; Varmus HE
EMBO J; 1995 Feb; 14(4):842-52. PubMed ID: 7882986
[TBL] [Abstract][Full Text] [Related]
10. Programmed -1 frameshifting efficiency correlates with RNA pseudoknot conformational plasticity, not resistance to mechanical unfolding.
Ritchie DB; Foster DA; Woodside MT
Proc Natl Acad Sci U S A; 2012 Oct; 109(40):16167-72. PubMed ID: 22988073
[TBL] [Abstract][Full Text] [Related]
11. The role of RNA pseudoknot stem 1 length in the promotion of efficient -1 ribosomal frameshifting.
Napthine S; Liphardt J; Bloys A; Routledge S; Brierley I
J Mol Biol; 1999 May; 288(3):305-20. PubMed ID: 10329144
[TBL] [Abstract][Full Text] [Related]
12. mRNA-Mediated Duplexes Play Dual Roles in the Regulation of Bidirectional Ribosomal Frameshifting.
Huang WP; Cho CP; Chang KY
Int J Mol Sci; 2018 Dec; 19(12):. PubMed ID: 30518074
[TBL] [Abstract][Full Text] [Related]
13. The 9-A solution: how mRNA pseudoknots promote efficient programmed -1 ribosomal frameshifting.
Plant EP; Jacobs KL; Harger JW; Meskauskas A; Jacobs JL; Baxter JL; Petrov AN; Dinman JD
RNA; 2003 Feb; 9(2):168-74. PubMed ID: 12554858
[TBL] [Abstract][Full Text] [Related]
14. A genome-wide analysis of RNA pseudoknots that stimulate efficient -1 ribosomal frameshifting or readthrough in animal viruses.
Huang X; Cheng Q; Du Z
Biomed Res Int; 2013; 2013():984028. PubMed ID: 24298557
[TBL] [Abstract][Full Text] [Related]
15. A dynamical model of programmed -1 ribosomal frameshifting.
Xie P
J Theor Biol; 2013 Nov; 336():119-31. PubMed ID: 23911574
[TBL] [Abstract][Full Text] [Related]
16. Comparative studies of frameshifting and nonframeshifting RNA pseudoknots: a mutational and NMR investigation of pseudoknots derived from the bacteriophage T2 gene 32 mRNA and the retroviral gag-pro frameshift site.
Wang Y; Wills NM; Du Z; Rangan A; Atkins JF; Gesteland RF; Hoffman DW
RNA; 2002 Aug; 8(8):981-96. PubMed ID: 12212853
[TBL] [Abstract][Full Text] [Related]
17. Translocation kinetics and structural dynamics of ribosomes are modulated by the conformational plasticity of downstream pseudoknots.
Wu B; Zhang H; Sun R; Peng S; Cooperman BS; Goldman YE; Chen C
Nucleic Acids Res; 2018 Oct; 46(18):9736-9748. PubMed ID: 30011005
[TBL] [Abstract][Full Text] [Related]
18. Ribosomal pausing during translation of an RNA pseudoknot.
Somogyi P; Jenner AJ; Brierley I; Inglis SC
Mol Cell Biol; 1993 Nov; 13(11):6931-40. PubMed ID: 8413285
[TBL] [Abstract][Full Text] [Related]
19. Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use.
Atkins JF; Loughran G; Bhatt PR; Firth AE; Baranov PV
Nucleic Acids Res; 2016 Sep; 44(15):7007-78. PubMed ID: 27436286
[TBL] [Abstract][Full Text] [Related]
20. Formation of frameshift-stimulating RNA pseudoknots is facilitated by remodeling of their folding intermediates.
Hsu CF; Chang KC; Chen YL; Hsieh PS; Lee AI; Tu JY; Chen YT; Wen JD
Nucleic Acids Res; 2021 Jul; 49(12):6941-6957. PubMed ID: 34161580
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
