BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

405 related articles for article (PubMed ID: 21913086)

  • 1. Using ChIP-seq technology to generate high-resolution profiles of histone modifications.
    O'Geen H; Echipare L; Farnham PJ
    Methods Mol Biol; 2011; 791():265-86. PubMed ID: 21913086
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Genome-wide epigenetic analysis of human pluripotent stem cells by ChIP and ChIP-Seq.
    Hitchler MJ; Rice JC
    Methods Mol Biol; 2011; 767():253-67. PubMed ID: 21822881
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ChIP-chip versus ChIP-seq: lessons for experimental design and data analysis.
    Ho JW; Bishop E; Karchenko PV; Nègre N; White KP; Park PJ
    BMC Genomics; 2011 Feb; 12():134. PubMed ID: 21356108
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Quantitatively profiling genome-wide patterns of histone modifications in Arabidopsis thaliana using ChIP-seq.
    Luo C; Lam E
    Methods Mol Biol; 2014; 1112():177-93. PubMed ID: 24478015
    [TBL] [Abstract][Full Text] [Related]  

  • 5. ChIP-Seq: Library Preparation and Sequencing.
    Sheaffer KL; Schug J
    Methods Mol Biol; 2016; 1402():101-117. PubMed ID: 26721486
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Protocol to apply spike-in ChIP-seq to capture massive histone acetylation in human cells.
    Wu D; Wang L; Huang H
    STAR Protoc; 2021 Sep; 2(3):100681. PubMed ID: 34337446
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genome-Wide Identification of Transcription Factor-Binding Sites in Quiescent Adult Neural Stem Cells.
    Mukherjee S; Hsieh J
    Methods Mol Biol; 2018; 1686():265-286. PubMed ID: 29030827
    [TBL] [Abstract][Full Text] [Related]  

  • 8. ChIP-seq and beyond: new and improved methodologies to detect and characterize protein-DNA interactions.
    Furey TS
    Nat Rev Genet; 2012 Dec; 13(12):840-52. PubMed ID: 23090257
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Bioinformatics Methods for ChIP-seq Histone Analysis.
    Servant N
    Methods Mol Biol; 2022; 2529():267-293. PubMed ID: 35733020
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Whole Genome Chromatin IP-Sequencing (ChIP-Seq) in Skeletal Muscle Cells.
    So KK; Peng XL; Sun H; Wang H
    Methods Mol Biol; 2017; 1668():15-25. PubMed ID: 28842899
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Profiling Histone Modifications in Synchronized Floral Tissues for Quantitative Resolution of Chromatin and Transcriptome Dynamics.
    Engelhorn J; Wellmer F; Carles CC
    Methods Mol Biol; 2018; 1675():271-296. PubMed ID: 29052197
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ChIP on chip and ChIP-Seq assays: genome-wide analysis of transcription factor binding and histone modifications.
    Pillai S; Chellappan SP
    Methods Mol Biol; 2015; 1288():447-72. PubMed ID: 25827896
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Profiling Histone Methylation in Low Numbers of Cells.
    Brind'Amour J; Lorincz MC
    Methods Mol Biol; 2022; 2529():229-251. PubMed ID: 35733018
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Genome-wide mapping of nucleosome occupancy, histone modifications, and gene expression using next-generation sequencing technology.
    Wei G; Hu G; Cui K; Zhao K
    Methods Enzymol; 2012; 513():297-313. PubMed ID: 22929775
    [TBL] [Abstract][Full Text] [Related]  

  • 15. ChIP-seq Data Processing for PcG Proteins and Associated Histone Modifications.
    Bogdanovic O; van Heeringen SJ
    Methods Mol Biol; 2016; 1480():37-53. PubMed ID: 27659973
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Genome-wide localization of protein-DNA binding and histone modification by a Bayesian change-point method with ChIP-seq data.
    Xing H; Mo Y; Liao W; Zhang MQ
    PLoS Comput Biol; 2012; 8(7):e1002613. PubMed ID: 22844240
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Role of ChIP-seq in the discovery of transcription factor binding sites, differential gene regulation mechanism, epigenetic marks and beyond.
    Mundade R; Ozer HG; Wei H; Prabhu L; Lu T
    Cell Cycle; 2014; 13(18):2847-52. PubMed ID: 25486472
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Quantitative Comparison of Multiple Chromatin Immunoprecipitation-Sequencing (ChIP-seq) Experiments with spikChIP.
    Blanco E; Ballaré C; Di Croce L; Aranda S
    Methods Mol Biol; 2023; 2624():55-72. PubMed ID: 36723809
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Histone Modification Analysis of Low-Mappability Regions.
    Yoshizawa-Sugata N; Masai H
    Methods Mol Biol; 2023; 2519():163-185. PubMed ID: 36066721
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Chromatin integration labeling for mapping DNA-binding proteins and modifications with low input.
    Handa T; Harada A; Maehara K; Sato S; Nakao M; Goto N; Kurumizaka H; Ohkawa Y; Kimura H
    Nat Protoc; 2020 Oct; 15(10):3334-3360. PubMed ID: 32807906
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 21.