These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

124 related articles for article (PubMed ID: 21918621)

  • 21. Binding site and affinity prediction of general anesthetics to protein targets using docking.
    Liu R; Perez-Aguilar JM; Liang D; Saven JG
    Anesth Analg; 2012 May; 114(5):947-55. PubMed ID: 22392968
    [TBL] [Abstract][Full Text] [Related]  

  • 22. AutoDock VinaXB: implementation of XBSF, new empirical halogen bond scoring function, into AutoDock Vina.
    Koebel MR; Schmadeke G; Posner RG; Sirimulla S
    J Cheminform; 2016; 8():27. PubMed ID: 27195023
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Synthesis, Molecular Docking, Molecular Dynamics Studies, and Biological Evaluation of 4H-Chromone-1,2,3,4-tetrahydropyrimidine-5-carboxylate Derivatives as Potential Antileukemic Agents.
    Dolatkhah Z; Javanshir S; Sadr AS; Hosseini J; Sardari S
    J Chem Inf Model; 2017 Jun; 57(6):1246-1257. PubMed ID: 28524659
    [TBL] [Abstract][Full Text] [Related]  

  • 24. A Hybrid Cuckoo Search and Differential Evolution Approach to Protein⁻Ligand Docking.
    Lin H; Siu SWI
    Int J Mol Sci; 2018 Oct; 19(10):. PubMed ID: 30326669
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Novel scoring functions comprising QXP, SASA, and protein side-chain entropy terms.
    Giordanetto F; Cotesta S; Catana C; Trosset JY; Vulpetti A; Stouten PF; Kroemer RT
    J Chem Inf Comput Sci; 2004; 44(3):882-93. PubMed ID: 15154753
    [TBL] [Abstract][Full Text] [Related]  

  • 26. The Augmenting Effects of Desolvation and Conformational Energy Terms on the Predictions of Docking Programs against mPGES-1.
    Gupta A; Chaudhary N; Kakularam KR; Pallu R; Polamarasetty A
    PLoS One; 2015; 10(8):e0134472. PubMed ID: 26305898
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Correcting the impact of docking pose generation error on binding affinity prediction.
    Li H; Leung KS; Wong MH; Ballester PJ
    BMC Bioinformatics; 2016 Sep; 17(Suppl 11):308. PubMed ID: 28185549
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Cation charge and size selectivity of the C2 domain of cytosolic phospholipase A(2).
    Nalefski EA; Falke JJ
    Biochemistry; 2002 Jan; 41(4):1109-22. PubMed ID: 11802709
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Prediction of water and metal binding sites and their affinities by using the Fold-X force field.
    Schymkowitz JW; Rousseau F; Martins IC; Ferkinghoff-Borg J; Stricher F; Serrano L
    Proc Natl Acad Sci U S A; 2005 Jul; 102(29):10147-52. PubMed ID: 16006526
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Incorporating structural similarity into a scoring function to enhance the prediction of binding affinities.
    Ji B; He X; Zhang Y; Zhai J; Man VH; Liu S; Wang J
    J Cheminform; 2021 Feb; 13(1):11. PubMed ID: 33588902
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Prediction of trypsin/molecular fragment binding affinities by free energy decomposition and empirical scores.
    Benson ML; Faver JC; Ucisik MN; Dashti DS; Zheng Z; Merz KM
    J Comput Aided Mol Des; 2012 May; 26(5):647-59. PubMed ID: 22476578
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Is It Reliable to Use Common Molecular Docking Methods for Comparing the Binding Affinities of Enantiomer Pairs for Their Protein Target?
    Ramírez D; Caballero J
    Int J Mol Sci; 2016 Apr; 17(4):. PubMed ID: 27104528
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Calcium Ions Modulate Amino Acid Sensing of the Chemoreceptor Mlp24 of
    Takahashi Y; Nishiyama SI; Sumita K; Kawagishi I; Imada K
    J Bacteriol; 2019 May; 201(9):. PubMed ID: 30745373
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Accounting for ligand conformational restriction in calculations of protein-ligand binding affinities.
    Gao C; Park MS; Stern HA
    Biophys J; 2010 Mar; 98(5):901-10. PubMed ID: 20197044
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Calculating an optimal box size for ligand docking and virtual screening against experimental and predicted binding pockets.
    Feinstein WP; Brylinski M
    J Cheminform; 2015; 7():18. PubMed ID: 26082804
    [TBL] [Abstract][Full Text] [Related]  

  • 36. The binding modes and binding affinities of artemisinin derivatives with Plasmodium falciparum Ca2+-ATPase (PfATP6).
    Naik PK; Srivastava M; Bajaj P; Jain S; Dubey A; Ranjan P; Kumar R; Singh H
    J Mol Model; 2011 Feb; 17(2):333-57. PubMed ID: 20461426
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Differential interaction of peptides and protein surface structures with free metal ions and surface-immobilized metal ions.
    Hutchens TW; Yip TT
    J Chromatogr; 1990 Feb; 500():531-42. PubMed ID: 2329149
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Probing Ca2+-induced conformational changes in porcine calmodulin by H/D exchange and ESI-MS: effect of cations and ionic strength.
    Zhu MM; Rempel DL; Zhao J; Giblin DE; Gross ML
    Biochemistry; 2003 Dec; 42(51):15388-97. PubMed ID: 14690449
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Ca2+ regulation of ion transport in the Na+/Ca2+ exchanger.
    Hilge M
    J Biol Chem; 2012 Sep; 287(38):31641-9. PubMed ID: 22822067
    [TBL] [Abstract][Full Text] [Related]  

  • 40.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.