236 related articles for article (PubMed ID: 21945336)
21. FAST: a novel protein structure alignment algorithm.
Zhu J; Weng Z
Proteins; 2005 Feb; 58(3):618-27. PubMed ID: 15609341
[TBL] [Abstract][Full Text] [Related]
22. COPid: composition based protein identification.
Kumar M; Thakur V; Raghava GP
In Silico Biol; 2008; 8(2):121-8. PubMed ID: 18928200
[TBL] [Abstract][Full Text] [Related]
23. A high level interface to SCOP and ASTRAL implemented in python.
Casbon JA; Crooks GE; Saqi MA
BMC Bioinformatics; 2006 Jan; 7():10. PubMed ID: 16403221
[TBL] [Abstract][Full Text] [Related]
24. Using progressive methods for global multiple sequence alignment.
Mount DW
Cold Spring Harb Protoc; 2009 Jul; 2009(7):pdb.top43. PubMed ID: 20147224
[TBL] [Abstract][Full Text] [Related]
25. Accurate anchoring alignment of divergent sequences.
Huang W; Umbach DM; Li L
Bioinformatics; 2006 Jan; 22(1):29-34. PubMed ID: 16301203
[TBL] [Abstract][Full Text] [Related]
26. Comparison of linear gap penalties and profile-based variable gap penalties in profile-profile alignments.
Wang C; Yan RX; Wang XF; Si JN; Zhang Z
Comput Biol Chem; 2011 Oct; 35(5):308-18. PubMed ID: 22000802
[TBL] [Abstract][Full Text] [Related]
27. A local multiple alignment method for detection of non-coding RNA sequences.
Tabei Y; Asai K
Bioinformatics; 2009 Jun; 25(12):1498-505. PubMed ID: 19376823
[TBL] [Abstract][Full Text] [Related]
28. A new progressive-iterative algorithm for multiple structure alignment.
Lupyan D; Leo-Macias A; Ortiz AR
Bioinformatics; 2005 Aug; 21(15):3255-63. PubMed ID: 15941743
[TBL] [Abstract][Full Text] [Related]
29. Optimizing the size of the sequence profiles to increase the accuracy of protein sequence alignments generated by profile-profile algorithms.
Poleksic A; Fienup M
Bioinformatics; 2008 May; 24(9):1145-53. PubMed ID: 18337259
[TBL] [Abstract][Full Text] [Related]
30. Database similarity searches.
Plewniak F
Methods Mol Biol; 2008; 484():361-78. PubMed ID: 18592192
[TBL] [Abstract][Full Text] [Related]
31. From analysis of protein structural alignments toward a novel approach to align protein sequences.
Sunyaev SR; Bogopolsky GA; Oleynikova NV; Vlasov PK; Finkelstein AV; Roytberg MA
Proteins; 2004 Feb; 54(3):569-82. PubMed ID: 14748004
[TBL] [Abstract][Full Text] [Related]
32. An efficient, versatile and scalable pattern growth approach to mine frequent patterns in unaligned protein sequences.
Ye K; Kosters WA; Ijzerman AP
Bioinformatics; 2007 Mar; 23(6):687-93. PubMed ID: 17237070
[TBL] [Abstract][Full Text] [Related]
33. SIMAP--the similarity matrix of proteins.
Arnold R; Rattei T; Tischler P; Truong MD; Stümpflen V; Mewes W
Bioinformatics; 2005 Sep; 21 Suppl 2():ii42-6. PubMed ID: 16204123
[TBL] [Abstract][Full Text] [Related]
34. On the quality of tree-based protein classification.
Lazareva-Ulitsky B; Diemer K; Thomas PD
Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
[TBL] [Abstract][Full Text] [Related]
35. Statistical distributions of optimal global alignment scores of random protein sequences.
Pang H; Tang J; Chen SS; Tao S
BMC Bioinformatics; 2005 Oct; 6():257. PubMed ID: 16225696
[TBL] [Abstract][Full Text] [Related]
36. Computing posterior probabilities for score-based alignments using ppALIGN.
Wolfsheimer S; Hartmann A; Rabus R; Nuel G
Stat Appl Genet Mol Biol; 2012 May; 11(4):Article 1. PubMed ID: 22628350
[TBL] [Abstract][Full Text] [Related]
37. [Estimation of the quality of global alignment of amino acid sequences based on evolution criterion].
Polianovskiĭ VO; Tumanian VG
Biofizika; 2013; 58(2):197-202. PubMed ID: 23755543
[TBL] [Abstract][Full Text] [Related]
38. GLProbs: Aligning Multiple Sequences Adaptively.
Ye Y; Cheung DW; Wang Y; Yiu SM; Zhan Q; Lam TW; Ting HF
IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(1):67-78. PubMed ID: 26357079
[TBL] [Abstract][Full Text] [Related]
39. Estimation of P-values for global alignments of protein sequences.
Webber C; Barton GJ
Bioinformatics; 2001 Dec; 17(12):1158-67. PubMed ID: 11751224
[TBL] [Abstract][Full Text] [Related]
40. Detailed protein sequence alignment based on Spectral Similarity Score (SSS).
Gupta K; Thomas D; Vidya SV; Venkatesh KV; Ramakumar S
BMC Bioinformatics; 2005 Apr; 6():105. PubMed ID: 15850477
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
