These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
297 related articles for article (PubMed ID: 21949266)
1. Models, algorithms and programs for phylogeny reconciliation. Doyon JP; Ranwez V; Daubin V; Berry V Brief Bioinform; 2011 Sep; 12(5):392-400. PubMed ID: 21949266 [TBL] [Abstract][Full Text] [Related]
2. Reconstructing histories of complex gene clusters on a phylogeny. Vinar T; Brejová B; Song G; Siepel A J Comput Biol; 2010 Sep; 17(9):1267-79. PubMed ID: 20874408 [TBL] [Abstract][Full Text] [Related]
3. Modeling gene family evolution and reconciling phylogenetic discord. Szöllosi GJ; Daubin V Methods Mol Biol; 2012; 856():29-51. PubMed ID: 22399454 [TBL] [Abstract][Full Text] [Related]
4. Reconstruction of ancient molecular phylogeny. Guigó R; Muchnik I; Smith TF Mol Phylogenet Evol; 1996 Oct; 6(2):189-213. PubMed ID: 8899723 [TBL] [Abstract][Full Text] [Related]
5. Placing paleopolyploidy in relation to taxon divergence: a phylogenetic analysis in legumes using 39 gene families. Pfeil BE; Schlueter JA; Shoemaker RC; Doyle JJ Syst Biol; 2005 Jun; 54(3):441-54. PubMed ID: 16012110 [TBL] [Abstract][Full Text] [Related]
6. Exploring the space of gene/species reconciliations with transfers. Chan YB; Ranwez V; Scornavacca C J Math Biol; 2015 Nov; 71(5):1179-209. PubMed ID: 25502987 [TBL] [Abstract][Full Text] [Related]
7. [Reconstructing genes evolution along a species tree]. Gorbunov KIu; Liubetskiĭ VA Mol Biol (Mosk); 2009; 43(5):946-58. PubMed ID: 19899641 [TBL] [Abstract][Full Text] [Related]
8. Inferring gene duplications, transfers and losses can be done in a discrete framework. Ranwez V; Scornavacca C; Doyon JP; Berry V J Math Biol; 2016 Jun; 72(7):1811-44. PubMed ID: 26337177 [TBL] [Abstract][Full Text] [Related]
9. Reconciling gene and genome duplication events: using multiple nuclear gene families to infer the phylogeny of the aquatic plant family Pontederiaceae. Ness RW; Graham SW; Barrett SC Mol Biol Evol; 2011 Nov; 28(11):3009-18. PubMed ID: 21633114 [TBL] [Abstract][Full Text] [Related]
10. Genomes as documents of evolutionary history. Boussau B; Daubin V Trends Ecol Evol; 2010 Apr; 25(4):224-32. PubMed ID: 19880211 [TBL] [Abstract][Full Text] [Related]
11. Exact Algorithms for Duplication-Transfer-Loss Reconciliation with Non-Binary Gene Trees. Kordi M; Bansal MS IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(4):1077-1090. PubMed ID: 28622673 [TBL] [Abstract][Full Text] [Related]
12. Inferring incomplete lineage sorting, duplications, transfers and losses with reconciliations. Chan YB; Ranwez V; Scornavacca C J Theor Biol; 2017 Nov; 432():1-13. PubMed ID: 28801222 [TBL] [Abstract][Full Text] [Related]
13. The serine repeat antigen (SERA) gene family phylogeny in Plasmodium: the impact of GC content and reconciliation of gene and species trees. Bourgon R; Delorenzi M; Sargeant T; Hodder AN; Crabb BS; Speed TP Mol Biol Evol; 2004 Nov; 21(11):2161-71. PubMed ID: 15306658 [TBL] [Abstract][Full Text] [Related]
14. Genome duplication and gene-family evolution: the case of three OXPHOS gene families. De Grassi A; Lanave C; Saccone C Gene; 2008 Sep; 421(1-2):1-6. PubMed ID: 18573316 [TBL] [Abstract][Full Text] [Related]
15. [Tree reconciliation: reconstruction of species evolution by phylogenetic gene trees]. V'iugin VV; Gel'fand MS; Liubetskiĭ VA Mol Biol (Mosk); 2002; 36(5):807-16. PubMed ID: 12391844 [TBL] [Abstract][Full Text] [Related]
16. Fast algorithm for the reconciliation of gene trees and LGT networks. Scornavacca C; Mayol JCP; Cardona G J Theor Biol; 2017 Apr; 418():129-137. PubMed ID: 28111320 [TBL] [Abstract][Full Text] [Related]
17. [Identification of the horizontal gene transfer based on phylogenetic data]. V'iugin VV; Gel'fand MS; Liubetskiĭ VA Mol Biol (Mosk); 2003; 37(4):674-87. PubMed ID: 12942641 [TBL] [Abstract][Full Text] [Related]
18. A new genomic evolutionary model for rearrangements, duplications, and losses that applies across eukaryotes and prokaryotes. Lin Y; Moret BM J Comput Biol; 2011 Sep; 18(9):1055-64. PubMed ID: 21899415 [TBL] [Abstract][Full Text] [Related]
19. On the Complexity of Duplication-Transfer-Loss Reconciliation with Non-Binary Gene Trees. Kordi M; Bansal MS IEEE/ACM Trans Comput Biol Bioinform; 2017; 14(3):587-599. PubMed ID: 28055898 [TBL] [Abstract][Full Text] [Related]
20. Ancestral state reconstructions for genomes. Ouzounis CA Curr Opin Genet Dev; 2005 Dec; 15(6):595-600. PubMed ID: 16216489 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]