271 related articles for article (PubMed ID: 21963987)
41. Key roles of the downstream mobile jaw of Escherichia coli RNA polymerase in transcription initiation.
Drennan A; Kraemer M; Capp M; Gries T; Ruff E; Sheppard C; Wigneshweraraj S; Artsimovitch I; Record MT
Biochemistry; 2012 Nov; 51(47):9447-59. PubMed ID: 23116321
[TBL] [Abstract][Full Text] [Related]
42. On the mechanism of inhibition of phage T7 RNA polymerase by lac repressor.
Lopez PJ; Guillerez J; Sousa R; Dreyfus M
J Mol Biol; 1998 Mar; 276(5):861-75. PubMed ID: 9566192
[TBL] [Abstract][Full Text] [Related]
43. Mitochondrial transcription factor Mtf1 traps the unwound non-template strand to facilitate open complex formation.
Paratkar S; Patel SS
J Biol Chem; 2010 Feb; 285(6):3949-3956. PubMed ID: 20008320
[TBL] [Abstract][Full Text] [Related]
44. Pathway of promoter melting by Bacillus subtilis RNA polymerase at a stable RNA promoter: effects of temperature, delta protein, and sigma factor mutations.
Juang YL; Helmann JD
Biochemistry; 1995 Jul; 34(26):8465-73. PubMed ID: 7599136
[TBL] [Abstract][Full Text] [Related]
45. Interplay between the beta' clamp and the beta' jaw domains during DNA opening by the bacterial RNA polymerase at sigma54-dependent promoters.
Wigneshweraraj SR; Savalia D; Severinov K; Buck M
J Mol Biol; 2006 Jun; 359(5):1182-95. PubMed ID: 16725156
[TBL] [Abstract][Full Text] [Related]
46. RNA polymerase-promoter interactions determining different stability of the Escherichia coli and Thermus aquaticus transcription initiation complexes.
Mekler V; Minakhin L; Kuznedelov K; Mukhamedyarov D; Severinov K
Nucleic Acids Res; 2012 Dec; 40(22):11352-62. PubMed ID: 23087380
[TBL] [Abstract][Full Text] [Related]
47. Compensatory evolution in response to a novel RNA polymerase: orthologous replacement of a central network gene.
Bull JJ; Springman R; Molineux IJ
Mol Biol Evol; 2007 Apr; 24(4):900-8. PubMed ID: 17220516
[TBL] [Abstract][Full Text] [Related]
48. Mode of action of the TyrR protein: repression and activation of the tyrP promoter of Escherichia coli.
Yang J; Hwang JS; Camakaris H; Irawaty W; Ishihama A; Pittard J
Mol Microbiol; 2004 Apr; 52(1):243-56. PubMed ID: 15049824
[TBL] [Abstract][Full Text] [Related]
49. Real-Time Single-Molecule Studies of RNA Polymerase-Promoter Open Complex Formation Reveal Substantial Heterogeneity Along the Promoter-Opening Pathway.
Malinen AM; Bakermans J; Aalto-Setälä E; Blessing M; Bauer DLV; Parilova O; Belogurov GA; Dulin D; Kapanidis AN
J Mol Biol; 2022 Jan; 434(2):167383. PubMed ID: 34863780
[TBL] [Abstract][Full Text] [Related]
50. [Visualization of elongation complexes for t7 Rna polymerase by atomic force microscopy].
Limanskaia OIu; Limanskiĭ AP
Mol Biol (Mosk); 2008; 42(3):533-42. PubMed ID: 18702313
[TBL] [Abstract][Full Text] [Related]
51. RNA polymerase molecular beacon as tool for studies of RNA polymerase-promoter interactions.
Mekler V; Severinov K
Methods; 2015 Sep; 86():19-26. PubMed ID: 25956222
[TBL] [Abstract][Full Text] [Related]
52. Prevalence of RNA polymerase stalling at Escherichia coli promoters after open complex formation.
Hatoum A; Roberts J
Mol Microbiol; 2008 Apr; 68(1):17-28. PubMed ID: 18333883
[TBL] [Abstract][Full Text] [Related]
53. Functionally distinct RNA polymerase binding sites in the phage Mu mom promoter region.
Balke V; Nagaraja V; Gindlesperger T; Hattman S
Nucleic Acids Res; 1992 Jun; 20(11):2777-84. PubMed ID: 1535436
[TBL] [Abstract][Full Text] [Related]
54. T7 RNA polymerase mutants with altered promoter specificities.
Raskin CA; Diaz GA; McAllister WT
Proc Natl Acad Sci U S A; 1993 Apr; 90(8):3147-51. PubMed ID: 8475053
[TBL] [Abstract][Full Text] [Related]
55. A promoter recognition mechanism common to yeast mitochondrial and phage t7 RNA polymerases.
Nayak D; Guo Q; Sousa R
J Biol Chem; 2009 May; 284(20):13641-13647. PubMed ID: 19307179
[TBL] [Abstract][Full Text] [Related]
56. Repression of transcription initiation at 434 P(R) by 434 repressor: effects on transition of a closed to an open promoter complex.
Xu J; Koudelka GB
J Mol Biol; 2001 Jun; 309(3):573-87. PubMed ID: 11397081
[TBL] [Abstract][Full Text] [Related]
57. Activation and repression of transcription at two different phage phi29 promoters are mediated by interaction of the same residues of regulatory protein p4 with RNA polymerase.
Monsalve M; Mencia M; Rojo F; Salas M
EMBO J; 1996 Jan; 15(2):383-91. PubMed ID: 8617213
[TBL] [Abstract][Full Text] [Related]
58. Reprint of: inhibition of Escherichia coli RNAp by T7 Gp2 protein: role of negatively charged strip of amino acid residues in Gp2.
Sheppard C; Cámara B; Shadrin A; Akulenko N; Liu M; Baldwin G; Severinov K; Cota E; Matthews S; Wigneshweraraj SR
J Mol Biol; 2011 Oct; 412(5):832-41. PubMed ID: 21819993
[TBL] [Abstract][Full Text] [Related]
59. A novel mode for transcription inhibition mediated by PNA-induced R-loops with a model in vitro system.
D'Souza AD; Belotserkovskii BP; Hanawalt PC
Biochim Biophys Acta Gene Regul Mech; 2018 Feb; 1861(2):158-166. PubMed ID: 29357316
[TBL] [Abstract][Full Text] [Related]
60. Structural origins of
Saecker RM; Chen J; Chiu CE; Malone B; Sotiris J; Ebrahim M; Yen LY; Eng ET; Darst SA
Proc Natl Acad Sci U S A; 2021 Oct; 118(40):. PubMed ID: 34599106
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]