These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

215 related articles for article (PubMed ID: 22035328)

  • 1. A geometric arrangement algorithm for structure determination of symmetric protein homo-oligomers from NOEs and RDCs.
    Martin JW; Yan AK; Bailey-Kellogg C; Zhou P; Donald BR
    J Comput Biol; 2011 Nov; 18(11):1507-23. PubMed ID: 22035328
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A graphical method for analyzing distance restraints using residual dipolar couplings for structure determination of symmetric protein homo-oligomers.
    Martin JW; Yan AK; Bailey-Kellogg C; Zhou P; Donald BR
    Protein Sci; 2011 Jun; 20(6):970-85. PubMed ID: 21413097
    [TBL] [Abstract][Full Text] [Related]  

  • 3. An efficient and accurate algorithm for assigning nuclear overhauser effect restraints using a rotamer library ensemble and residual dipolar couplings.
    Wang L; Donald BR
    Proc IEEE Comput Syst Bioinform Conf; 2005; ():189-202. PubMed ID: 16447976
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An algebraic geometry approach to protein structure determination from NMR data.
    Wang L; Mettu RR; Donald BR
    Proc IEEE Comput Syst Bioinform Conf; 2005; ():235-46. PubMed ID: 16447981
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Structure determination of symmetric homo-oligomers by a complete search of symmetry configuration space, using NMR restraints and van der Waals packing.
    Potluri S; Yan AK; Chou JJ; Donald BR; Bailey-Kellogg C
    Proteins; 2006 Oct; 65(1):203-19. PubMed ID: 16897780
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A complete algorithm to resolve ambiguity for intersubunit NOE assignment in structure determination of symmetric homo-oligomers.
    Potluri S; Yan AK; Donald BR; Bailey-Kellogg C
    Protein Sci; 2007 Jan; 16(1):69-81. PubMed ID: 17192589
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Global folds of proteins with low densities of NOEs using residual dipolar couplings: application to the 370-residue maltodextrin-binding protein.
    Mueller GA; Choy WY; Yang D; Forman-Kay JD; Venters RA; Kay LE
    J Mol Biol; 2000 Jun; 300(1):197-212. PubMed ID: 10864509
    [TBL] [Abstract][Full Text] [Related]  

  • 8. REDCRAFT: A computational platform using residual dipolar coupling NMR data for determining structures of perdeuterated proteins in solution.
    Cole CA; Daigham NS; Liu G; Montelione GT; Valafar H
    PLoS Comput Biol; 2021 Feb; 17(2):e1008060. PubMed ID: 33524015
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A Hausdorff-based NOE assignment algorithm using protein backbone determined from residual dipolar couplings and rotamer patterns.
    Zeng J; Tripathy C; Zhou P; Donald BR
    Comput Syst Bioinformatics Conf; 2008; 7():169-81. PubMed ID: 19642278
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Docking of protein-protein complexes on the basis of highly ambiguous intermolecular distance restraints derived from 1H/15N chemical shift mapping and backbone 15N-1H residual dipolar couplings using conjoined rigid body/torsion angle dynamics.
    Clore GM; Schwieters CD
    J Am Chem Soc; 2003 Mar; 125(10):2902-12. PubMed ID: 12617657
    [TBL] [Abstract][Full Text] [Related]  

  • 11. NMR structural inference of symmetric homo-oligomers.
    Chandola H; Yan AK; Potluri S; Donald BR; Bailey-Kellogg C
    J Comput Biol; 2011 Dec; 18(12):1757-75. PubMed ID: 21718128
    [TBL] [Abstract][Full Text] [Related]  

  • 12. An Exhaustive Search Algorithm to Aid NMR-Based Structure Determination of Rotationally Symmetric Transmembrane Oligomers.
    Yang J; Piai A; Shen HB; Chou JJ
    Sci Rep; 2017 Dec; 7(1):17373. PubMed ID: 29234103
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Determination of the structures of symmetric protein oligomers from NMR chemical shifts and residual dipolar couplings.
    Sgourakis NG; Lange OF; DiMaio F; André I; Fitzkee NC; Rossi P; Montelione GT; Bax A; Baker D
    J Am Chem Soc; 2011 Apr; 133(16):6288-98. PubMed ID: 21466200
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Residual dipolar couplings in NMR structure analysis.
    Lipsitz RS; Tjandra N
    Annu Rev Biophys Biomol Struct; 2004; 33():387-413. PubMed ID: 15139819
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Exploring the limits of precision and accuracy of protein structures determined by nuclear magnetic resonance spectroscopy.
    Clore GM; Robien MA; Gronenborn AM
    J Mol Biol; 1993 May; 231(1):82-102. PubMed ID: 8496968
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Exact solutions for internuclear vectors and backbone dihedral angles from NH residual dipolar couplings in two media, and their application in a systematic search algorithm for determining protein backbone structure.
    Wang L; Donald BR
    J Biomol NMR; 2004 Jul; 29(3):223-42. PubMed ID: 15213422
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Increased usability, algorithmic improvements and incorporation of data mining for structure calculation of proteins with REDCRAFT software package.
    Cole C; Parks C; Rachele J; Valafar H
    BMC Bioinformatics; 2020 Dec; 21(Suppl 9):204. PubMed ID: 33272215
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Completely automated, highly error-tolerant macromolecular structure determination from multidimensional nuclear overhauser enhancement spectra and chemical shift assignments.
    Kuszewski J; Schwieters CD; Garrett DS; Byrd RA; Tjandra N; Clore GM
    J Am Chem Soc; 2004 May; 126(20):6258-73. PubMed ID: 15149223
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Use of residual dipolar couplings in structural analysis of protein-ligand complexes by solution NMR spectroscopy.
    Jain NU
    Methods Mol Biol; 2009; 544():231-52. PubMed ID: 19488703
    [TBL] [Abstract][Full Text] [Related]  

  • 20. RDC-assisted modeling of symmetric protein homo-oligomers.
    Wang X; Bansal S; Jiang M; Prestegard JH
    Protein Sci; 2008 May; 17(5):899-907. PubMed ID: 18436958
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.