These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Integrative multicellular biological modeling: a case study of 3D epidermal development using GPU algorithms. Christley S; Lee B; Dai X; Nie Q BMC Syst Biol; 2010 Aug; 4():107. PubMed ID: 20696053 [TBL] [Abstract][Full Text] [Related]
3. 1D-3D hybrid modeling-from multi-compartment models to full resolution models in space and time. Grein S; Stepniewski M; Reiter S; Knodel MM; Queisser G Front Neuroinform; 2014; 8():68. PubMed ID: 25120463 [TBL] [Abstract][Full Text] [Related]
4. Quantifying Modes of 3D Cell Migration. Driscoll MK; Danuser G Trends Cell Biol; 2015 Dec; 25(12):749-759. PubMed ID: 26603943 [TBL] [Abstract][Full Text] [Related]
5. A computational model of bleb formation. Strychalski W; Guy RD Math Med Biol; 2013 Jun; 30(2):115-30. PubMed ID: 22294562 [TBL] [Abstract][Full Text] [Related]
6. An analytical tool that quantifies cellular morphology changes from three-dimensional fluorescence images. Haass-Koffler CL; Naeemuddin M; Bartlett SE J Vis Exp; 2012 Aug; (66):e4233. PubMed ID: 22951512 [TBL] [Abstract][Full Text] [Related]
7. Comparative mapping of crawling-cell morphodynamics in deep learning-based feature space. Imoto D; Saito N; Nakajima A; Honda G; Ishida M; Sugita T; Ishihara S; Katagiri K; Okimura C; Iwadate Y; Sawai S PLoS Comput Biol; 2021 Aug; 17(8):e1009237. PubMed ID: 34383753 [TBL] [Abstract][Full Text] [Related]
8. Modeling large-scale dynamic processes in the cell: polarization, waves, and division. Sept D; Carlsson AE Q Rev Biophys; 2014 Aug; 47(3):221-48. PubMed ID: 25124728 [TBL] [Abstract][Full Text] [Related]
9. Putting the actin cytoskeleton into perspective: pathophysiology of ischemic alterations. Molitoris BA Am J Physiol; 1997 Apr; 272(4 Pt 2):F430-3. PubMed ID: 9140042 [TBL] [Abstract][Full Text] [Related]
10. Viscoelastic gel-strip model for the simulation of migrating cells. Sakamoto Y; Prudhomme S; Zaman MH Ann Biomed Eng; 2011 Nov; 39(11):2735-49. PubMed ID: 21800204 [TBL] [Abstract][Full Text] [Related]
11. Modeling, validation and verification of three-dimensional cell-scaffold contacts from terabyte-sized images. Bajcsy P; Yoon S; Florczyk SJ; Hotaling NA; Simon M; Szczypinski PM; Schaub NJ; Simon CG; Brady M; Sriram RD BMC Bioinformatics; 2017 Nov; 18(1):526. PubMed ID: 29183290 [TBL] [Abstract][Full Text] [Related]
12. What makes cells move: requirements and obstacles for spontaneous cell motility. Binamé F; Pawlak G; Roux P; Hibner U Mol Biosyst; 2010 Apr; 6(4):648-61. PubMed ID: 20237642 [TBL] [Abstract][Full Text] [Related]
13. Pulling back to move forward. Ridley AJ Cell; 2004 Feb; 116(3):357-8. PubMed ID: 15016370 [TBL] [Abstract][Full Text] [Related]
14. A mesoscopic simulator to uncover heterogeneity and evolutionary dynamics in tumors. Jiménez-Sánchez J; Martínez-Rubio Á; Popov A; Pérez-Beteta J; Azimzade Y; Molina-García D; Belmonte-Beitia J; Calvo GF; Pérez-García VM PLoS Comput Biol; 2021 Feb; 17(2):e1008266. PubMed ID: 33566821 [TBL] [Abstract][Full Text] [Related]
15. Actin-based propulsion of a microswimmer. Leshansky AM Phys Rev E Stat Nonlin Soft Matter Phys; 2006 Jul; 74(1 Pt 1):012901. PubMed ID: 16907142 [TBL] [Abstract][Full Text] [Related]
16. Internal dynamics of actin structures involved in the cell motility and adhesion: Modeling of the podosomes at the molecular level. Hu S; Biben T; Wang X; Jurdic P; Géminard JC J Theor Biol; 2011 Feb; 270(1):25-30. PubMed ID: 21075123 [TBL] [Abstract][Full Text] [Related]
17. Joining forces: crosstalk between biochemical signalling and physical forces orchestrates cellular polarity and dynamics. Saha S; Nagy TL; Weiner OD Philos Trans R Soc Lond B Biol Sci; 2018 May; 373(1747):. PubMed ID: 29632270 [TBL] [Abstract][Full Text] [Related]
18. Systems Biology-Driven Hypotheses Tested In Vivo: The Need to Advancing Molecular Imaging Tools. Verma G; Palombo A; Grigioni M; La Monaca M; D'Avenio G Methods Mol Biol; 2018; 1702():337-359. PubMed ID: 29119514 [TBL] [Abstract][Full Text] [Related]
19. Potential and limitations of microscopy and Raman spectroscopy for live-cell analysis of 3D cell cultures. Charwat V; Schütze K; Holnthoner W; Lavrentieva A; Gangnus R; Hofbauer P; Hoffmann C; Angres B; Kasper C J Biotechnol; 2015 Jul; 205():70-81. PubMed ID: 25687101 [TBL] [Abstract][Full Text] [Related]