These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

79 related articles for article (PubMed ID: 22038731)

  • 1. PresCont: predicting protein-protein interfaces utilizing four residue properties.
    Zellner H; Staudigel M; Trenner T; Bittkowski M; Wolowski V; Icking C; Merkl R
    Proteins; 2012 Jan; 80(1):154-68. PubMed ID: 22038731
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Fast model-based protein homology detection without alignment.
    Hochreiter S; Heusel M; Obermayer K
    Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Sequence and structural analysis of binding site residues in protein-protein complexes.
    Gromiha MM; Yokota K; Fukui K
    Int J Biol Macromol; 2010 Mar; 46(2):187-92. PubMed ID: 20026105
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.
    Yang AS; Honig B
    J Mol Biol; 2000 Aug; 301(3):691-711. PubMed ID: 10966778
    [TBL] [Abstract][Full Text] [Related]  

  • 5. An examination of the conservation of surface patch polarity for proteins.
    Shanahan HP; Thornton JM
    Bioinformatics; 2004 Sep; 20(14):2197-204. PubMed ID: 15073014
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Prediction of hot spots in protein interfaces using a random forest model with hybrid features.
    Wang L; Liu ZP; Zhang XS; Chen L
    Protein Eng Des Sel; 2012 Mar; 25(3):119-26. PubMed ID: 22258275
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Correlation and prediction of gene expression level from amino acid and dipeptide composition of its protein.
    Raghava GP; Han JH
    BMC Bioinformatics; 2005 Mar; 6():59. PubMed ID: 15773999
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Propensity vectors of low-ASA residue pairs in the distinction of protein interactions.
    Liu Q; Li J
    Proteins; 2010 Feb; 78(3):589-602. PubMed ID: 19768686
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Using protein binding site prediction to improve protein docking.
    Huang B; Schroeder M
    Gene; 2008 Oct; 422(1-2):14-21. PubMed ID: 18616991
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Prediction of RNA-binding residues in proteins from primary sequence using an enriched random forest model with a novel hybrid feature.
    Ma X; Guo J; Wu J; Liu H; Yu J; Xie J; Sun X
    Proteins; 2011 Apr; 79(4):1230-9. PubMed ID: 21268114
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Combining features in a graphical model to predict protein binding sites.
    Wierschin T; Wang K; Welter M; Waack S; Stanke M
    Proteins; 2015 May; 83(5):844-52. PubMed ID: 25663045
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Predicting functional sites with an automated algorithm suitable for heterogeneous datasets.
    La D; Livesay DR
    BMC Bioinformatics; 2005 May; 6():116. PubMed ID: 15890082
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Support vector machine learning from heterogeneous data: an empirical analysis using protein sequence and structure.
    Lewis DP; Jebara T; Noble WS
    Bioinformatics; 2006 Nov; 22(22):2753-60. PubMed ID: 16966363
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Multi-RELIEF: a method to recognize specificity determining residues from multiple sequence alignments using a Machine-Learning approach for feature weighting.
    Ye K; Feenstra KA; Heringa J; Ijzerman AP; Marchiori E
    Bioinformatics; 2008 Jan; 24(1):18-25. PubMed ID: 18024975
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Statistical geometry based prediction of nonsynonymous SNP functional effects using random forest and neuro-fuzzy classifiers.
    Barenboim M; Masso M; Vaisman II; Jamison DC
    Proteins; 2008 Jun; 71(4):1930-9. PubMed ID: 18186470
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Physicochemical descriptors to discriminate protein-protein interactions in permanent and transient complexes selected by means of machine learning algorithms.
    Block P; Paern J; Hüllermeier E; Sanschagrin P; Sotriffer CA; Klebe G
    Proteins; 2006 Nov; 65(3):607-22. PubMed ID: 16955490
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Prediction of biological protein-protein interactions using atom-type and amino acid properties.
    Aziz MM; Maleki M; Rueda L; Raza M; Banerjee S
    Proteomics; 2011 Oct; 11(19):3802-10. PubMed ID: 21789780
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Support vector machines for prediction of dihedral angle regions.
    Zimmermann O; Hansmann UH
    Bioinformatics; 2006 Dec; 22(24):3009-15. PubMed ID: 17005536
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Homology-based modeling of 3D structures of protein-protein complexes using alignments of modified sequence profiles.
    Kundrotas PJ; Lensink MF; Alexov E
    Int J Biol Macromol; 2008 Aug; 43(2):198-208. PubMed ID: 18572239
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Specificity of molecular interactions in transient protein-protein interaction interfaces.
    Cho KI; Lee K; Lee KH; Kim D; Lee D
    Proteins; 2006 Nov; 65(3):593-606. PubMed ID: 16948160
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 4.