These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

245 related articles for article (PubMed ID: 22075996)

  • 1. SNPeffect 4.0: on-line prediction of molecular and structural effects of protein-coding variants.
    De Baets G; Van Durme J; Reumers J; Maurer-Stroh S; Vanhee P; Dopazo J; Schymkowitz J; Rousseau F
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D935-9. PubMed ID: 22075996
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SNPeffect 5.0: large-scale structural phenotyping of protein coding variants extracted from next-generation sequencing data using AlphaFold models.
    Janssen K; Duran-Romaña R; Bottu G; Guharoy M; Botzki A; Rousseau F; Schymkowitz J
    BMC Bioinformatics; 2023 Jul; 24(1):287. PubMed ID: 37464277
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases.
    Reumers J; Conde L; Medina I; Maurer-Stroh S; Van Durme J; Dopazo J; Rousseau F; Schymkowitz J
    Nucleic Acids Res; 2008 Jan; 36(Database issue):D825-9. PubMed ID: 18086700
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SNPeffect: a database mapping molecular phenotypic effects of human non-synonymous coding SNPs.
    Reumers J; Schymkowitz J; Ferkinghoff-Borg J; Stricher F; Serrano L; Rousseau F
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D527-32. PubMed ID: 15608254
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SNPeffect v2.0: a new step in investigating the molecular phenotypic effects of human non-synonymous SNPs.
    Reumers J; Maurer-Stroh S; Schymkowitz J; Rousseau F
    Bioinformatics; 2006 Sep; 22(17):2183-5. PubMed ID: 16809394
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Solubis: a webserver to reduce protein aggregation through mutation.
    Van Durme J; De Baets G; Van Der Kant R; Ramakers M; Ganesan A; Wilkinson H; Gallardo R; Rousseau F; Schymkowitz J
    Protein Eng Des Sel; 2016 Aug; 29(8):285-9. PubMed ID: 27284085
    [TBL] [Abstract][Full Text] [Related]  

  • 7. VarMod: modelling the functional effects of non-synonymous variants.
    Pappalardo M; Wass MN
    Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W331-6. PubMed ID: 24906884
    [TBL] [Abstract][Full Text] [Related]  

  • 8. MODBASE, a database of annotated comparative protein structure models, and associated resources.
    Pieper U; Eswar N; Braberg H; Madhusudhan MS; Davis FP; Stuart AC; Mirkovic N; Rossi A; Marti-Renom MA; Fiser A; Webb B; Greenblatt D; Huang CC; Ferrin TE; Sali A
    Nucleic Acids Res; 2004 Jan; 32(Database issue):D217-22. PubMed ID: 14681398
    [TBL] [Abstract][Full Text] [Related]  

  • 9. MODBASE: a database of annotated comparative protein structure models and associated resources.
    Pieper U; Eswar N; Davis FP; Braberg H; Madhusudhan MS; Rossi A; Marti-Renom M; Karchin R; Webb BM; Eramian D; Shen MY; Kelly L; Melo F; Sali A
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D291-5. PubMed ID: 16381869
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The FoldX web server: an online force field.
    Schymkowitz J; Borg J; Stricher F; Nys R; Rousseau F; Serrano L
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W382-8. PubMed ID: 15980494
    [TBL] [Abstract][Full Text] [Related]  

  • 11. MSV3d: database of human MisSense Variants mapped to 3D protein structure.
    Luu TD; Rusu AM; Walter V; Ripp R; Moulinier L; Muller J; Toursel T; Thompson JD; Poch O; Nguyen H
    Database (Oxford); 2012; 2012():bas018. PubMed ID: 22491796
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ActiveDriverDB: human disease mutations and genome variation in post-translational modification sites of proteins.
    Krassowski M; Paczkowska M; Cullion K; Huang T; Dzneladze I; Ouellette BFF; Yamada JT; Fradet-Turcotte A; Reimand J
    Nucleic Acids Res; 2018 Jan; 46(D1):D901-D910. PubMed ID: 29126202
    [TBL] [Abstract][Full Text] [Related]  

  • 13. VARIANT: Command Line, Web service and Web interface for fast and accurate functional characterization of variants found by Next-Generation Sequencing.
    Medina I; De Maria A; Bleda M; Salavert F; Alonso R; Gonzalez CY; Dopazo J
    Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W54-8. PubMed ID: 22693211
    [TBL] [Abstract][Full Text] [Related]  

  • 14. dbPTM: an information repository of protein post-translational modification.
    Lee TY; Huang HD; Hung JH; Huang HY; Yang YS; Wang TH
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D622-7. PubMed ID: 16381945
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Multilevel biological characterization of exomic variants at the protein level significantly improves the identification of their deleterious effects.
    Raimondi D; Gazzo AM; Rooman M; Lenaerts T; Vranken WF
    Bioinformatics; 2016 Jun; 32(12):1797-804. PubMed ID: 27153718
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Structure-PPi: a module for the annotation of cancer-related single-nucleotide variants at protein-protein interfaces.
    Vázquez M; Valencia A; Pons T
    Bioinformatics; 2015 Jul; 31(14):2397-9. PubMed ID: 25765346
    [TBL] [Abstract][Full Text] [Related]  

  • 17. VarQ: A Tool for the Structural and Functional Analysis of Human Protein Variants.
    Radusky L; Modenutti C; Delgado J; Bustamante JP; Vishnopolska S; Kiel C; Serrano L; Marti M; Turjanski A
    Front Genet; 2018; 9():620. PubMed ID: 30574164
    [TBL] [Abstract][Full Text] [Related]  

  • 18. GenProBiS: web server for mapping of sequence variants to protein binding sites.
    Konc J; Skrlj B; Erzen N; Kunej T; Janezic D
    Nucleic Acids Res; 2017 Jul; 45(W1):W253-W259. PubMed ID: 28498966
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Human non-synonymous SNPs: server and survey.
    Ramensky V; Bork P; Sunyaev S
    Nucleic Acids Res; 2002 Sep; 30(17):3894-900. PubMed ID: 12202775
    [TBL] [Abstract][Full Text] [Related]  

  • 20. WALTZ-DB 2.0: an updated database containing structural information of experimentally determined amyloid-forming peptides.
    Louros N; Konstantoulea K; De Vleeschouwer M; Ramakers M; Schymkowitz J; Rousseau F
    Nucleic Acids Res; 2020 Jan; 48(D1):D389-D393. PubMed ID: 31504823
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.