These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

152 related articles for article (PubMed ID: 22077765)

  • 1. Protein-protein binding sites prediction by 3D structural similarities.
    Guo F; Li SC; Wang L
    J Chem Inf Model; 2011 Dec; 51(12):3287-94. PubMed ID: 22077765
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Q-SiteFinder: an energy-based method for the prediction of protein-ligand binding sites.
    Laurie AT; Jackson RM
    Bioinformatics; 2005 May; 21(9):1908-16. PubMed ID: 15701681
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Protein-protein binding site prediction by local structural alignment.
    Carl N; Konc J; Vehar B; Janezic D
    J Chem Inf Model; 2010 Oct; 50(10):1906-13. PubMed ID: 20919700
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.
    Najmanovich R; Kurbatova N; Thornton J
    Bioinformatics; 2008 Aug; 24(16):i105-11. PubMed ID: 18689810
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Automated structure-based prediction of functional sites in proteins: applications to assessing the validity of inheriting protein function from homology in genome annotation and to protein docking.
    Aloy P; Querol E; Aviles FX; Sternberg MJ
    J Mol Biol; 2001 Aug; 311(2):395-408. PubMed ID: 11478868
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Protein-protein binding-sites prediction by protein surface structure conservation.
    Konc J; Janezic D
    J Chem Inf Model; 2007; 47(3):940-4. PubMed ID: 17388583
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Computing the protein binding sites.
    Guo F; Wang L
    BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S2. PubMed ID: 22759425
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Regulatory motif finding by logic regression.
    Keles S; van der Laan MJ; Vulpe C
    Bioinformatics; 2004 Nov; 20(16):2799-811. PubMed ID: 15166027
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Protein surface conservation in binding sites.
    Carl N; Konc J; Janezic D
    J Chem Inf Model; 2008 Jun; 48(6):1279-86. PubMed ID: 18476685
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Generation of 3D templates of active sites of proteins with rigid prosthetic groups.
    Nebel JC
    Bioinformatics; 2006 May; 22(10):1183-9. PubMed ID: 16473871
    [TBL] [Abstract][Full Text] [Related]  

  • 11. LFM-Pro: a tool for detecting significant local structural sites in proteins.
    Sacan A; Ozturk O; Ferhatosmanoglu H; Wang Y
    Bioinformatics; 2007 Mar; 23(6):709-16. PubMed ID: 17237050
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A holistic molecular docking approach for predicting protein-protein complex structure.
    Gong X; Liu B; Chang S; Li C; Chen W; Wang C
    Sci China Life Sci; 2010 Sep; 53(9):1152-61. PubMed ID: 21104376
    [TBL] [Abstract][Full Text] [Related]  

  • 13. ProMate: a structure based prediction program to identify the location of protein-protein binding sites.
    Neuvirth H; Raz R; Schreiber G
    J Mol Biol; 2004 Apr; 338(1):181-99. PubMed ID: 15050833
    [TBL] [Abstract][Full Text] [Related]  

  • 14. BSAlign: a rapid graph-based algorithm for detecting ligand-binding sites in protein structures.
    Aung Z; Tong JC
    Genome Inform; 2008; 21():65-76. PubMed ID: 19425148
    [TBL] [Abstract][Full Text] [Related]  

  • 15. PocketAlign a novel algorithm for aligning binding sites in protein structures.
    Yeturu K; Chandra N
    J Chem Inf Model; 2011 Jul; 51(7):1725-36. PubMed ID: 21662242
    [TBL] [Abstract][Full Text] [Related]  

  • 16. [Computational method for prediction of protein functional sites using specificity determinants].
    Kalinina OV; Rassel RB; Rakhmaninova AB; Gel'fand MS
    Mol Biol (Mosk); 2007; 41(1):151-62. PubMed ID: 17380902
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Detection of functionally important regions in "hypothetical proteins" of known structure.
    Nimrod G; Schushan M; Steinberg DM; Ben-Tal N
    Structure; 2008 Dec; 16(12):1755-63. PubMed ID: 19081051
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Predicting functional sites with an automated algorithm suitable for heterogeneous datasets.
    La D; Livesay DR
    BMC Bioinformatics; 2005 May; 6():116. PubMed ID: 15890082
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Highly specific prediction of phosphorylation sites in proteins.
    Koenig M; Grabe N
    Bioinformatics; 2004 Dec; 20(18):3620-7. PubMed ID: 15297298
    [TBL] [Abstract][Full Text] [Related]  

  • 20. STAR: predicting recombination sites from amino acid sequence.
    Bauer DC; Bodén M; Thier R; Gillam EM
    BMC Bioinformatics; 2006 Oct; 7():437. PubMed ID: 17026775
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.