263 related articles for article (PubMed ID: 22080565)
1. modMine: flexible access to modENCODE data.
Contrino S; Smith RN; Butano D; Carr A; Hu F; Lyne R; Rutherford K; Kalderimis A; Sullivan J; Carbon S; Kephart ET; Lloyd P; Stinson EO; Washington NL; Perry MD; Ruzanov P; Zha Z; Lewis SE; Stein LD; Micklem G
Nucleic Acids Res; 2012 Jan; 40(Database issue):D1082-8. PubMed ID: 22080565
[TBL] [Abstract][Full Text] [Related]
2. The modENCODE Data Coordination Center: lessons in harvesting comprehensive experimental details.
Washington NL; Stinson EO; Perry MD; Ruzanov P; Contrino S; Smith R; Zha Z; Lyne R; Carr A; Lloyd P; Kephart E; McKay SJ; Micklem G; Stein LD; Lewis SE
Database (Oxford); 2011; 2011():bar023. PubMed ID: 21856757
[TBL] [Abstract][Full Text] [Related]
3. Lessons from modENCODE.
Brown JB; Celniker SE
Annu Rev Genomics Hum Genet; 2015; 16():31-53. PubMed ID: 26133010
[TBL] [Abstract][Full Text] [Related]
4. The Encyclopedia of DNA elements (ENCODE): data portal update.
Davis CA; Hitz BC; Sloan CA; Chan ET; Davidson JM; Gabdank I; Hilton JA; Jain K; Baymuradov UK; Narayanan AK; Onate KC; Graham K; Miyasato SR; Dreszer TR; Strattan JS; Jolanki O; Tanaka FY; Cherry JM
Nucleic Acids Res; 2018 Jan; 46(D1):D794-D801. PubMed ID: 29126249
[TBL] [Abstract][Full Text] [Related]
5. WormBase 2007.
Rogers A; Antoshechkin I; Bieri T; Blasiar D; Bastiani C; Canaran P; Chan J; Chen WJ; Davis P; Fernandes J; Fiedler TJ; Han M; Harris TW; Kishore R; Lee R; McKay S; Müller HM; Nakamura C; Ozersky P; Petcherski A; Schindelman G; Schwarz EM; Spooner W; Tuli MA; Van Auken K; Wang D; Wang X; Williams G; Yook K; Durbin R; Stein LD; Spieth J; Sternberg PW
Nucleic Acids Res; 2008 Jan; 36(Database issue):D612-7. PubMed ID: 17991679
[TBL] [Abstract][Full Text] [Related]
6. FlyBase 101--the basics of navigating FlyBase.
McQuilton P; St Pierre SE; Thurmond J;
Nucleic Acids Res; 2012 Jan; 40(Database issue):D706-14. PubMed ID: 22127867
[TBL] [Abstract][Full Text] [Related]
7. WormBase: new content and better access.
Bieri T; Blasiar D; Ozersky P; Antoshechkin I; Bastiani C; Canaran P; Chan J; Chen N; Chen WJ; Davis P; Fiedler TJ; Girard L; Han M; Harris TW; Kishore R; Lee R; McKay S; Müller HM; Nakamura C; Petcherski A; Rangarajan A; Rogers A; Schindelman G; Schwarz EM; Spooner W; Tuli MA; Van Auken K; Wang D; Wang X; Williams G; Durbin R; Stein LD; Sternberg PW; Spieth J
Nucleic Acids Res; 2007 Jan; 35(Database issue):D506-10. PubMed ID: 17099234
[TBL] [Abstract][Full Text] [Related]
8. FlyBase: anatomical data, images and queries.
Grumbling G; Strelets V
Nucleic Acids Res; 2006 Jan; 34(Database issue):D484-8. PubMed ID: 16381917
[TBL] [Abstract][Full Text] [Related]
9. Using WormBase: A Genome Biology Resource for Caenorhabditis elegans and Related Nematodes.
Grove C; Cain S; Chen WJ; Davis P; Harris T; Howe KL; Kishore R; Lee R; Paulini M; Raciti D; Tuli MA; Van Auken K; Williams G;
Methods Mol Biol; 2018; 1757():399-470. PubMed ID: 29761466
[TBL] [Abstract][Full Text] [Related]
10. SGCEdb: a flexible database and web interface integrating experimental results and analysis for structural genomics focusing on Caenorhabditis elegans.
Johnson DH; Tsao J; Luo M; Carson M
Nucleic Acids Res; 2006 Jan; 34(Database issue):D471-4. PubMed ID: 16381914
[TBL] [Abstract][Full Text] [Related]
11. Navigating and mining modENCODE data.
Boley N; Wan KH; Bickel PJ; Celniker SE
Methods; 2014 Jun; 68(1):38-47. PubMed ID: 24636835
[TBL] [Abstract][Full Text] [Related]
12. The ModERN Resource: Genome-Wide Binding Profiles for Hundreds of
Kudron MM; Victorsen A; Gevirtzman L; Hillier LW; Fisher WW; Vafeados D; Kirkey M; Hammonds AS; Gersch J; Ammouri H; Wall ML; Moran J; Steffen D; Szynkarek M; Seabrook-Sturgis S; Jameel N; Kadaba M; Patton J; Terrell R; Corson M; Durham TJ; Park S; Samanta S; Han M; Xu J; Yan KK; Celniker SE; White KP; Ma L; Gerstein M; Reinke V; Waterston RH
Genetics; 2018 Mar; 208(3):937-949. PubMed ID: 29284660
[TBL] [Abstract][Full Text] [Related]
13. WormBase: a multi-species resource for nematode biology and genomics.
Harris TW; Chen N; Cunningham F; Tello-Ruiz M; Antoshechkin I; Bastiani C; Bieri T; Blasiar D; Bradnam K; Chan J; Chen CK; Chen WJ; Davis P; Kenny E; Kishore R; Lawson D; Lee R; Muller HM; Nakamura C; Ozersky P; Petcherski A; Rogers A; Sabo A; Schwarz EM; Van Auken K; Wang Q; Durbin R; Spieth J; Sternberg PW; Stein LD
Nucleic Acids Res; 2004 Jan; 32(Database issue):D411-7. PubMed ID: 14681445
[TBL] [Abstract][Full Text] [Related]
14. Alliance of Genome Resources Portal: unified model organism research platform.
Alliance of Genome Resources Consortium
Nucleic Acids Res; 2020 Jan; 48(D1):D650-D658. PubMed ID: 31552413
[TBL] [Abstract][Full Text] [Related]
15. FlyBase: integration and improvements to query tools.
Wilson RJ; Goodman JL; Strelets VB;
Nucleic Acids Res; 2008 Jan; 36(Database issue):D588-93. PubMed ID: 18160408
[TBL] [Abstract][Full Text] [Related]
16. OpenFlyData: an exemplar data web integrating gene expression data on the fruit fly Drosophila melanogaster.
Miles A; Zhao J; Klyne G; White-Cooper H; Shotton D
J Biomed Inform; 2010 Oct; 43(5):752-61. PubMed ID: 20382263
[TBL] [Abstract][Full Text] [Related]
17. Cross-organism analysis using InterMine.
Lyne R; Sullivan J; Butano D; Contrino S; Heimbach J; Hu F; Kalderimis A; Lyne M; Smith RN; Štěpán R; Balakrishnan R; Binkley G; Harris T; Karra K; Moxon SA; Motenko H; Neuhauser S; Ruzicka L; Cherry M; Richardson J; Stein L; Westerfield M; Worthey E; Micklem G
Genesis; 2015 Aug; 53(8):547-60. PubMed ID: 26097192
[TBL] [Abstract][Full Text] [Related]
18. WormBase: better software, richer content.
Schwarz EM; Antoshechkin I; Bastiani C; Bieri T; Blasiar D; Canaran P; Chan J; Chen N; Chen WJ; Davis P; Fiedler TJ; Girard L; Harris TW; Kenny EE; Kishore R; Lawson D; Lee R; Müller HM; Nakamura C; Ozersky P; Petcherski A; Rogers A; Spooner W; Tuli MA; Van Auken K; Wang D; Durbin R; Spieth J; Stein LD; Sternberg PW
Nucleic Acids Res; 2006 Jan; 34(Database issue):D475-8. PubMed ID: 16381915
[TBL] [Abstract][Full Text] [Related]
19. FlyBase : a database for the Drosophila research community.
Drysdale R;
Methods Mol Biol; 2008; 420():45-59. PubMed ID: 18641940
[TBL] [Abstract][Full Text] [Related]
20. WormBase: methods for data mining and comparative genomics.
Harris TW; Stein LD
Methods Mol Biol; 2006; 351():31-50. PubMed ID: 16988424
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
