BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

134 related articles for article (PubMed ID: 22081597)

  • 1. Analyzing gene coexpression data by an evolutionary model.
    Schütte M; Mutwil M; Persson S; Ebenhöh O
    Genome Inform; 2010; 24():154-63. PubMed ID: 22081597
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Quantitative inference of dynamic regulatory pathways via microarray data.
    Chang WC; Li CW; Chen BS
    BMC Bioinformatics; 2005 Mar; 6():44. PubMed ID: 15748298
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Inferring large-scale gene regulatory networks using a low-order constraint-based algorithm.
    Wang M; Augusto Benedito V; Xuechun Zhao P; Udvardi M
    Mol Biosyst; 2010 Jun; 6(6):988-98. PubMed ID: 20485743
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A gene-coexpression network for global discovery of conserved genetic modules.
    Stuart JM; Segal E; Koller D; Kim SK
    Science; 2003 Oct; 302(5643):249-55. PubMed ID: 12934013
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Weighted lasso in graphical Gaussian modeling for large gene network estimation based on microarray data.
    Shimamura T; Imoto S; Yamaguchi R; Miyano S
    Genome Inform; 2007; 19():142-53. PubMed ID: 18546512
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Gene regulatory network clustering for graph layout based on microarray gene expression data.
    Kojima K; Imoto S; Nagasaki M; Miyano S
    Genome Inform; 2010; 24():84-95. PubMed ID: 22081591
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Nonlinear differential equation model for quantification of transcriptional regulation applied to microarray data of Saccharomyces cerevisiae.
    Vu TT; Vohradsky J
    Nucleic Acids Res; 2007; 35(1):279-87. PubMed ID: 17170011
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Functional and evolutionary inference in gene networks: does topology matter?
    Siegal ML; Promislow DE; Bergman A
    Genetica; 2007 Jan; 129(1):83-103. PubMed ID: 16897451
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Inference of gene regulatory networks by means of dynamic differential Bayesian networks and nonparametric regression.
    Sugimoto N; Iba H
    Genome Inform; 2004; 15(2):121-30. PubMed ID: 15706498
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A microarray data-based semi-kinetic method for predicting quantitative dynamics of genetic networks.
    Yugi K; Nakayama Y; Kojima S; Kitayama T; Tomita M
    BMC Bioinformatics; 2005 Dec; 6():299. PubMed ID: 16351711
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Identifying drug active pathways from gene networks estimated by gene expression data.
    Tamada Y; Imoto S; Tashiro K; Kuhara S; Miyano S
    Genome Inform; 2005; 16(1):182-91. PubMed ID: 16362921
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Supervised inference of gene regulatory networks from positive and unlabeled examples.
    Mordelet F; Vert JP
    Methods Mol Biol; 2013; 939():47-58. PubMed ID: 23192540
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A hybrid Bayesian network learning method for constructing gene networks.
    Wang M; Chen Z; Cloutier S
    Comput Biol Chem; 2007 Oct; 31(5-6):361-72. PubMed ID: 17889617
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Interpreting patterns of gene expression: signatures of coregulation, the data processing inequality, and triplet motifs.
    Ku WL; Duggal G; Li Y; Girvan M; Ott E
    PLoS One; 2012; 7(2):e31969. PubMed ID: 22393375
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Extraction of correlated gene clusters by multiple graph comparison.
    Nakaya A; Goto S; Kanehisa M
    Genome Inform; 2001; 12():44-53. PubMed ID: 11791223
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Gene interaction networks based on kernel correlation metrics.
    Cheng L; Khorasani K; Ding Y; Guo X
    Int J Comput Biol Drug Des; 2013; 6(1-2):72-92. PubMed ID: 23428475
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Network topology and the evolution of dynamics in an artificial genetic regulatory network model created by whole genome duplication and divergence.
    Dwight Kuo P; Banzhaf W; Leier A
    Biosystems; 2006 Sep; 85(3):177-200. PubMed ID: 16650928
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Weighted-LASSO for structured network inference from time course data.
    Charbonnier C; Chiquet J; Ambroise C
    Stat Appl Genet Mol Biol; 2010; 9():Article 15. PubMed ID: 20196750
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A non-homogeneous dynamic Bayesian network with sequentially coupled interaction parameters for applications in systems and synthetic biology.
    Grzegorczyk M; Husmeier D
    Stat Appl Genet Mol Biol; 2012 Jul; 11(4):. PubMed ID: 22850067
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The condition-dependent transcriptional network in Escherichia coli.
    Lemmens K; De Bie T; Dhollander T; Monsieurs P; De Moor B; Collado-Vides J; Engelen K; Marchal K
    Ann N Y Acad Sci; 2009 Mar; 1158():29-35. PubMed ID: 19348629
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.