BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

165 related articles for article (PubMed ID: 22123737)

  • 1. hiPathDB: a human-integrated pathway database with facile visualization.
    Yu N; Seo J; Rho K; Jang Y; Park J; Kim WK; Lee S
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D797-802. PubMed ID: 22123737
    [TBL] [Abstract][Full Text] [Related]  

  • 2. IPAVS: Integrated Pathway Resources, Analysis and Visualization System.
    Sreenivasaiah PK; Rani S; Cayetano J; Arul N; Kim DH
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D803-8. PubMed ID: 22140115
    [TBL] [Abstract][Full Text] [Related]  

  • 3. HPD: an online integrated human pathway database enabling systems biology studies.
    Chowbina SR; Wu X; Zhang F; Li PM; Pandey R; Kasamsetty HN; Chen JY
    BMC Bioinformatics; 2009 Oct; 10 Suppl 11(Suppl 11):S5. PubMed ID: 19811689
    [TBL] [Abstract][Full Text] [Related]  

  • 4. IPAD: the Integrated Pathway Analysis Database for Systematic Enrichment Analysis.
    Zhang F; Drabier R
    BMC Bioinformatics; 2012; 13 Suppl 15(Suppl 15):S7. PubMed ID: 23046449
    [TBL] [Abstract][Full Text] [Related]  

  • 5. cPath: open source software for collecting, storing, and querying biological pathways.
    Cerami EG; Bader GD; Gross BE; Sander C
    BMC Bioinformatics; 2006 Nov; 7():497. PubMed ID: 17101041
    [TBL] [Abstract][Full Text] [Related]  

  • 6. An editor for pathway drawing and data visualization in the Biopathways Workbench.
    Byrnes RW; Cotter D; Maer A; Li J; Nadeau D; Subramaniam S
    BMC Syst Biol; 2009 Oct; 3():99. PubMed ID: 19799790
    [TBL] [Abstract][Full Text] [Related]  

  • 7. PATIKAweb: a Web interface for analyzing biological pathways through advanced querying and visualization.
    Dogrusoz U; Erson EZ; Giral E; Demir E; Babur O; Cetintas A; Colak R
    Bioinformatics; 2006 Feb; 22(3):374-5. PubMed ID: 16287939
    [TBL] [Abstract][Full Text] [Related]  

  • 8. BioNetBuilder: automatic integration of biological networks.
    Avila-Campillo I; Drew K; Lin J; Reiss DJ; Bonneau R
    Bioinformatics; 2007 Feb; 23(3):392-3. PubMed ID: 17138585
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Reactome: a database of reactions, pathways and biological processes.
    Croft D; O'Kelly G; Wu G; Haw R; Gillespie M; Matthews L; Caudy M; Garapati P; Gopinath G; Jassal B; Jupe S; Kalatskaya I; Mahajan S; May B; Ndegwa N; Schmidt E; Shamovsky V; Yung C; Birney E; Hermjakob H; D'Eustachio P; Stein L
    Nucleic Acids Res; 2011 Jan; 39(Database issue):D691-7. PubMed ID: 21067998
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Interleukins and their signaling pathways in the Reactome biological pathway database.
    Jupe S; Ray K; Roca CD; Varusai T; Shamovsky V; Stein L; D'Eustachio P; Hermjakob H
    J Allergy Clin Immunol; 2018 Apr; 141(4):1411-1416. PubMed ID: 29378288
    [TBL] [Abstract][Full Text] [Related]  

  • 11. R spider: a network-based analysis of gene lists by combining signaling and metabolic pathways from Reactome and KEGG databases.
    Antonov AV; Schmidt EE; Dietmann S; Krestyaninova M; Hermjakob H
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W78-83. PubMed ID: 20519200
    [TBL] [Abstract][Full Text] [Related]  

  • 12. MADNet: microarray database network web server.
    Segota I; Bartonicek N; Vlahovicek K
    Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W332-5. PubMed ID: 18480121
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Pathway Commons, a web resource for biological pathway data.
    Cerami EG; Gross BE; Demir E; Rodchenkov I; Babur O; Anwar N; Schultz N; Bader GD; Sander C
    Nucleic Acids Res; 2011 Jan; 39(Database issue):D685-90. PubMed ID: 21071392
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Reactome from a WikiPathways Perspective.
    Bohler A; Wu G; Kutmon M; Pradhana LA; Coort SL; Hanspers K; Haw R; Pico AR; Evelo CT
    PLoS Comput Biol; 2016 May; 12(5):e1004941. PubMed ID: 27203685
    [TBL] [Abstract][Full Text] [Related]  

  • 15. ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining.
    Huan T; Sivachenko AY; Harrison SH; Chen JY
    BMC Bioinformatics; 2008 Aug; 9 Suppl 9(Suppl 9):S5. PubMed ID: 18793469
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Reactome pathway analysis to enrich biological discovery in proteomics data sets.
    Haw R; Hermjakob H; D'Eustachio P; Stein L
    Proteomics; 2011 Sep; 11(18):3598-613. PubMed ID: 21751369
    [TBL] [Abstract][Full Text] [Related]  

  • 17. High quality visualization of biochemical pathways in BioPath.
    Schreiber F
    In Silico Biol; 2002; 2(2):59-73. PubMed ID: 12066841
    [TBL] [Abstract][Full Text] [Related]  

  • 18. GeneNet: a gene network database and its automated visualization.
    Kolpakov FA; Ananko EA; Kolesov GB; Kolchanov NA
    Bioinformatics; 1998; 14(6):529-37. PubMed ID: 9694992
    [TBL] [Abstract][Full Text] [Related]  

  • 19. KEGG-based pathway visualization tool for complex omics data.
    Arakawa K; Kono N; Yamada Y; Mori H; Tomita M
    In Silico Biol; 2005; 5(4):419-23. PubMed ID: 16268787
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PyPathway: Python Package for Biological Network Analysis and Visualization.
    Xu Y; Luo XC
    J Comput Biol; 2018 May; 25(5):499-504. PubMed ID: 29641230
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.