These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

486 related articles for article (PubMed ID: 22144203)

  • 1. DeepBase: annotation and discovery of microRNAs and other noncoding RNAs from deep-sequencing data.
    Yang JH; Qu LH
    Methods Mol Biol; 2012; 822():233-48. PubMed ID: 22144203
    [TBL] [Abstract][Full Text] [Related]  

  • 2. miRNA data analysis: next-gen sequencing.
    Gunaratne PH; Coarfa C; Soibam B; Tandon A
    Methods Mol Biol; 2012; 822():273-88. PubMed ID: 22144206
    [TBL] [Abstract][Full Text] [Related]  

  • 3. deepBase v3.0: expression atlas and interactive analysis of ncRNAs from thousands of deep-sequencing data.
    Xie F; Liu S; Wang J; Xuan J; Zhang X; Qu L; Zheng L; Yang J
    Nucleic Acids Res; 2021 Jan; 49(D1):D877-D883. PubMed ID: 33175131
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A user-friendly computational workflow for the analysis of microRNA deep sequencing data.
    Majer A; Caligiuri KA; Booth SA
    Methods Mol Biol; 2013; 936():35-45. PubMed ID: 23007497
    [TBL] [Abstract][Full Text] [Related]  

  • 5. deepBase: a database for deeply annotating and mining deep sequencing data.
    Yang JH; Shao P; Zhou H; Chen YQ; Qu LH
    Nucleic Acids Res; 2010 Jan; 38(Database issue):D123-30. PubMed ID: 19966272
    [TBL] [Abstract][Full Text] [Related]  

  • 6. deepBase v2.0: identification, expression, evolution and function of small RNAs, LncRNAs and circular RNAs from deep-sequencing data.
    Zheng LL; Li JH; Wu J; Sun WJ; Liu S; Wang ZL; Zhou H; Yang JH; Qu LH
    Nucleic Acids Res; 2016 Jan; 44(D1):D196-202. PubMed ID: 26590255
    [TBL] [Abstract][Full Text] [Related]  

  • 7. RNAdb 2.0--an expanded database of mammalian non-coding RNAs.
    Pang KC; Stephen S; Dinger ME; Engström PG; Lenhard B; Mattick JS
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D178-82. PubMed ID: 17145715
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Sequence and structure analysis of noncoding RNAs.
    Washietl S
    Methods Mol Biol; 2010; 609():285-306. PubMed ID: 20221926
    [TBL] [Abstract][Full Text] [Related]  

  • 9. miRBase: the microRNA sequence database.
    Griffiths-Jones S
    Methods Mol Biol; 2006; 342():129-38. PubMed ID: 16957372
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Exploring the ncRNA-ncRNA patterns based on bridging rules.
    Chen F; Chen YP
    J Biomed Inform; 2010 Aug; 43(4):569-77. PubMed ID: 20152932
    [TBL] [Abstract][Full Text] [Related]  

  • 11. miRNA profiling of bilateral rat hippocampal CA3 by deep sequencing.
    Shinohara Y; Yahagi K; Kawano M; Nishiyori H; Kawazu C; Suzuki N; Manabe R; Hirase H
    Biochem Biophys Res Commun; 2011 Jun; 409(2):293-8. PubMed ID: 21575607
    [TBL] [Abstract][Full Text] [Related]  

  • 12. MicroRNA identification based on sequence and structure alignment.
    Wang X; Zhang J; Li F; Gu J; He T; Zhang X; Li Y
    Bioinformatics; 2005 Sep; 21(18):3610-4. PubMed ID: 15994192
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Deep sequencing of grapevine flower and berry short RNA library for discovery of novel microRNAs and validation of precise sequences of grapevine microRNAs deposited in miRBase.
    Wang C; Wang X; Kibet NK; Song C; Zhang C; Li X; Han J; Fang J
    Physiol Plant; 2011 Sep; 143(1):64-81. PubMed ID: 21496033
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Detection of small RNAs and microRNAs using deep sequencing technology.
    Havecker ER
    Methods Mol Biol; 2011; 732():55-68. PubMed ID: 21431705
    [TBL] [Abstract][Full Text] [Related]  

  • 15. mirExplorer: detecting microRNAs from genome and next generation sequencing data using the AdaBoost method with transition probability matrix and combined features.
    Guan DG; Liao JY; Qu ZH; Zhang Y; Qu LH
    RNA Biol; 2011; 8(5):922-34. PubMed ID: 21881406
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Discovery of microRNA regulatory networks by integrating multidimensional high-throughput data.
    Yang JH; Qu LH
    Adv Exp Med Biol; 2013; 774():251-66. PubMed ID: 23377977
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Computational analysis of small RNA cloning data.
    Berninger P; Gaidatzis D; van Nimwegen E; Zavolan M
    Methods; 2008 Jan; 44(1):13-21. PubMed ID: 18158128
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Computational identification of novel microRNAs and targets in Brassica napus.
    Xie FL; Huang SQ; Guo K; Xiang AL; Zhu YY; Nie L; Yang ZM
    FEBS Lett; 2007 Apr; 581(7):1464-74. PubMed ID: 17367786
    [TBL] [Abstract][Full Text] [Related]  

  • 19. starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data.
    Li JH; Liu S; Zhou H; Qu LH; Yang JH
    Nucleic Acids Res; 2014 Jan; 42(Database issue):D92-7. PubMed ID: 24297251
    [TBL] [Abstract][Full Text] [Related]  

  • 20. miRClassify: an advanced web server for miRNA family classification and annotation.
    Zou Q; Mao Y; Hu L; Wu Y; Ji Z
    Comput Biol Med; 2014 Feb; 45():157-60. PubMed ID: 24480175
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 25.