831 related articles for article (PubMed ID: 22144907)
1. Repetitive elements may comprise over two-thirds of the human genome.
de Koning AP; Gu W; Castoe TA; Batzer MA; Pollock DD
PLoS Genet; 2011 Dec; 7(12):e1002384. PubMed ID: 22144907
[TBL] [Abstract][Full Text] [Related]
2. Identification of repeat structure in large genomes using repeat probability clouds.
Gu W; Castoe TA; Hedges DJ; Batzer MA; Pollock DD
Anal Biochem; 2008 Sep; 380(1):77-83. PubMed ID: 18541131
[TBL] [Abstract][Full Text] [Related]
3. Transposable elements in disease-associated cryptic exons.
Vorechovsky I
Hum Genet; 2010 Feb; 127(2):135-54. PubMed ID: 19823873
[TBL] [Abstract][Full Text] [Related]
4. A novel group of families of short interspersed repetitive elements (SINEs) in Xenopus: evidence of a specific target site for DNA-mediated transposition of inverted-repeat SINEs.
Unsal K; Morgan GT
J Mol Biol; 1995 May; 248(4):812-23. PubMed ID: 7752242
[TBL] [Abstract][Full Text] [Related]
5. Transposable element annotation of the rice genome.
Juretic N; Bureau TE; Bruskiewich RM
Bioinformatics; 2004 Jan; 20(2):155-60. PubMed ID: 14734305
[TBL] [Abstract][Full Text] [Related]
6. Characterization and functional annotation of nested transposable elements in eukaryotic genomes.
Gao C; Xiao M; Ren X; Hayward A; Yin J; Wu L; Fu D; Li J
Genomics; 2012 Oct; 100(4):222-30. PubMed ID: 22800764
[TBL] [Abstract][Full Text] [Related]
7. [Computational approaches for identification and classification of transposable elements in eukaryotic genomes].
Xu HE; Zhang HH; Han MJ; Shen YH; Huang XZ; Xiang ZH; Zhang Z
Yi Chuan; 2012 Aug; 34(8):1009-19. PubMed ID: 22917906
[TBL] [Abstract][Full Text] [Related]
8. Functional microRNAs and target sites are created by lineage-specific transposition.
Spengler RM; Oakley CK; Davidson BL
Hum Mol Genet; 2014 Apr; 23(7):1783-93. PubMed ID: 24234653
[TBL] [Abstract][Full Text] [Related]
9. Improved repeat identification and masking in Dipterans.
Smith CD; Edgar RC; Yandell MD; Smith DR; Celniker SE; Myers EW; Karpen GH
Gene; 2007 Mar; 389(1):1-9. PubMed ID: 17137733
[TBL] [Abstract][Full Text] [Related]
10. Widespread occurrence of power-law distributions in inter-repeat distances shaped by genome dynamics.
Klimopoulos A; Sellis D; Almirantis Y
Gene; 2012 May; 499(1):88-98. PubMed ID: 22370293
[TBL] [Abstract][Full Text] [Related]
11. Establishing the baseline level of repetitive element expression in the human cortex.
Tyekucheva S; Yolken RH; McCombie WR; Parla J; Kramer M; Wheelan SJ; Sabunciyan S
BMC Genomics; 2011 Oct; 12():495. PubMed ID: 21985647
[TBL] [Abstract][Full Text] [Related]
12. Molecular reconstruction of extinct LINE-1 elements and their interaction with nonautonomous elements.
Wagstaff BJ; Kroutter EN; Derbes RS; Belancio VP; Roy-Engel AM
Mol Biol Evol; 2013 Jan; 30(1):88-99. PubMed ID: 22918960
[TBL] [Abstract][Full Text] [Related]
13. i-Genome: a database to summarize oligonucleotide data in genomes.
Lin FM; Huang HD; Chang YC; Horng JT
BMC Genomics; 2004 Oct; 5():78. PubMed ID: 15473908
[TBL] [Abstract][Full Text] [Related]
14. Mobile elements create structural variation: analysis of a complete human genome.
Xing J; Zhang Y; Han K; Salem AH; Sen SK; Huff CD; Zhou Q; Kirkness EF; Levy S; Batzer MA; Jorde LB
Genome Res; 2009 Sep; 19(9):1516-26. PubMed ID: 19439515
[TBL] [Abstract][Full Text] [Related]
15. Identification and annotation of repetitive sequences in fungal genomes.
Dhillon B; Goodwin SB
Methods Mol Biol; 2011; 722():33-50. PubMed ID: 21590411
[TBL] [Abstract][Full Text] [Related]
16. Improving prokaryotic transposable elements identification using a combination of de novo and profile HMM methods.
Kamoun C; Payen T; Hua-Van A; Filée J
BMC Genomics; 2013 Oct; 14():700. PubMed ID: 24118975
[TBL] [Abstract][Full Text] [Related]
17. Use of a mammalian interspersed repetitive (MIR) element in the coding and processing sequences of mammalian genes.
Murnane JP; Morales JF
Nucleic Acids Res; 1995 Aug; 23(15):2837-9. PubMed ID: 7659505
[TBL] [Abstract][Full Text] [Related]
18. DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome.
Aktaş T; Avşar Ilık İ; Maticzka D; Bhardwaj V; Pessoa Rodrigues C; Mittler G; Manke T; Backofen R; Akhtar A
Nature; 2017 Apr; 544(7648):115-119. PubMed ID: 28355180
[TBL] [Abstract][Full Text] [Related]
19. Evolutionary rates and patterns for human transcription factor binding sites derived from repetitive DNA.
Polavarapu N; Mariño-Ramírez L; Landsman D; McDonald JF; Jordan IK
BMC Genomics; 2008 May; 9():226. PubMed ID: 18485226
[TBL] [Abstract][Full Text] [Related]
20. Active Alu element "A-tails": size does matter.
Roy-Engel AM; Salem AH; Oyeniran OO; Deininger L; Hedges DJ; Kilroy GE; Batzer MA; Deininger PL
Genome Res; 2002 Sep; 12(9):1333-44. PubMed ID: 12213770
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
